CX288659

Overview
NameCX288659
Unique NameCX288659
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12370 contig Ccv1_Contig12370:106..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.253e-13
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 3
Query:   99 LYKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKIGKPVDIGEVSVSTS---LNALENMLW 506
            L+++L  LAE YGPI      +   VVVSSS  AK  ++  D IF++R  T           DI FSPYG  WR++RK  V E++T+  ++S   +R++ L   I  ++        + G ++V+ S     +L N+LW
Sbjct:   62 LHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEES-----ESGRIAVNVSKAISTSLANILW 195          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = 3
Query:  102 YKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQT-TVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKI-GKPVDIGEVSVSTSLNALENMLWXXXXXXXXHNDHTLEMKQLLDDIME 581
            ++   KL+  YGPI   +L +   VV S++  AKE ++  +  FSNR   TVA  T T G  D +F+PYG  W+ ++K  + E++    LD    +R+   K  I+ +    I G+ VD G   ++ S N +  M+          N+   EM++L+ D  E
Sbjct:   52 HQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENE-VEEMRKLVKDAAE 212          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.791e-13
Identity = 39/125 (31.20%), Postives = 73/125 (58.40%), Query Frame = 3
Query:   87 LGTDLYKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKIGKPVDIGE 461
            +G+  ++ L  LA+ YGP+    L   +F++VSS+  AKE+++  D  F++R  ++ T     G  DI FSPYG  WR++RK    E+++   + S   +R++ +KN I+ + + + G  V++ +
Sbjct:   36 VGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEE-GSVVNLSQ 159          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  105 KSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKIGKPVDI 455
            ++L KL   YGP+    L     +VVSS  +A EM++  D  F  R   +A      G  DI F+PYG  WR++RK    E+++   + S S +R+   K  I+ + ++  G P+D+
Sbjct:   58 QALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSI-HSSAGSPIDL 173          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.412e-11
Identity = 43/167 (25.75%), Postives = 79/167 (47.31%), Query Frame = 3
Query:   87 LGTDLYKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDL--FNNKIGKPVDIGEVSVSTSLNALENMLWXXXXXXXXHNDHTLEMKQLLDDIME 581
            LG   ++SL KL++ YGP+    L +K  +V SS    +++++  D ++SNR  +        G  D+ FSP+G  WR++R   V  +++N  + S    R++   N I  L   +N      D+ ++    + N +  +          +ND  ++ K  LD  +E
Sbjct:   41 LGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRV-----ALGKKYNDE-IDAKATLDKFVE 201          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.456e-11
Identity = 37/120 (30.83%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  102 YKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKIGKPVDIGE 461
            ++ L  LA+ YG +    +       VSS  +A+++++ +D++FSNR  T+A    T    D+ F+ YG  WR++RK  V ++ +    +S + +R +V K  +R +  N +GKP+++GE
Sbjct:   61 HRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRDEVDK-MVRSVSCN-VGKPINVGE 178          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.456e-11
Identity = 34/125 (27.20%), Postives = 67/125 (53.60%), Query Frame = 3
Query:   87 LGTDLYKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKIGKPVDIGE 461
            LG+  ++SL KL++ YGP+    L +K  +V SS   A+++++  D +++ R       +   G  D+ FSP+G  W ++R  +V  +++N  + S  D+R++   N I  +        +++GE
Sbjct:   52 LGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVINLGE 176          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 47/165 (28.48%), Postives = 82/165 (49.70%), Query Frame = 3
Query:   87 LGTDLYKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKI-GKPVDIGEVSVSTSLNALENMLWXXXXXXXXHNDHTLEMKQLLDDIM 578
            LG   ++SL KLA+ +GPI    L     +V+SS++ A+E+++ +D  FS R    A        + I F     +WR LR+ +   + +NSSL++   LR + ++  I       +  + V IG  +  TSLN L N ++        + D   E ++++ +IM
Sbjct:   44 LGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIF-SKDLTDPYEDSGKEFREVITNIM 207          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 3
Query:  102 YKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDL 422
            ++SL  L+  YGP+          +VVSS   A+E+++  D  F+NR  + A      GG D+VF PYG  WR+++   +  ++TN  + S   +R++ L   I+ L
Sbjct:   54 HRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKL 160          
BLAST of CX288659 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11
Identity = 35/138 (25.36%), Postives = 72/138 (52.17%), Query Frame = 3
Query:   87 LGTDLYKSLTKLAEAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSDLRKQVLKNTIRDLFNNKIGKPVDIGEVSVSTSLNALENM 500
            LG+  ++SL KL++ YGP+      +K  +V SS   A+++++  D ++++R  +      + G  D+ FSP+G  WRR +   V  +++N+ + S  ++R +   N I  +        +++GE   S + N +  +
Sbjct:   53 LGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCSLTNNIISRV 190          
The following BLAST results are available for this feature:
BLAST of CX288659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
C75A1_PINTA1.253e-1333.81Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C93A3_SOYBN1.636e-1330.86Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71DB_LOTJA2.791e-1331.20Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D8_SOYBN1.532e-1132.48Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A3_SOLME3.412e-1125.75Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C84A1_ARATH4.456e-1130.83Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME4.456e-1127.20Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C76B1_HELTU5.820e-1128.487-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C71AC_ARATH7.601e-1131.78Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME7.601e-1125.36Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC02002H08SK IF1 Citrus clementina cDNA clone C02002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288659 ID=CX288659; Name=CX288659; organism=Citrus clementina; type=EST; length=583bp
TCACGAAAACCAAAGCAAAGAAAGCAACTGCTCCGCCGCTGCCGCCCGGT
CCTCGGGGCTTGCCGTTGGTGGGTTACCTTCCATTTCTCGGCACTGACCT
GTACAAGTCACTTACAAAATTGGCTGAAGCCTATGGACCTATCTACAAGT
TCTGGCTGGCAAACAAATTATTTGTAGTAGTGAGCTCATCGTCAATAGCC
AAAGAAATGGTTCGTGACAAAGACACAATATTCTCTAACCGTCAAACAAC
TGTAGCAACTCTGACACCAACACTCGGAGGCAATGATATAGTGTTTTCCC
CGTATGGAGCTCAGTGGAGGAGACTAAGAAAAGCAATGGTGGGTGAGATG
ATGACAAATTCGAGCCTTGATTCTTGTTCAGATCTAAGGAAACAAGTGCT
GAAGAATACAATTAGAGATTTGTTTAATAACAAGATTGGCAAGCCTGTAG
ATATTGGTGAAGTGTCAGTTTCAACTTCACTCAATGCACTTGAGAACATG
CTGTGGGGAGGTGGCACTGGCTCTGGGGGACATAATGATCATACTCTTGA
GATGAAACAATTGCTTGATGATATCATGGAGCT
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