CX288680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288680 vs. ExPASy Swiss-Prot
Match: TTC38_PONAB (Tetratricopeptide repeat protein 38 OS=Pongo abelii GN=TTC38 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.714e-15 Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 89 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 541 A E ++L++ P D+L+LK + FY+G + D + ++ P+ + ++ GI +F L+E AE+ AK+ L IN D WS H + H+ + K+ ++FM+ + HN+WH AL YL L IYD HI Sbjct: 127 ACELWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDQAEKLAKEALSINPTDAWSVHTVAHIHEMKAEIKDGLEFMQH-SETLWKDSDMLACHNYWHWAL-YLIEKGEYEAALTIYDTHI 279
BLAST of CX288680 vs. ExPASy Swiss-Prot
Match: TTC38_HUMAN (Tetratricopeptide repeat protein 38 OS=Homo sapiens GN=TTC38 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.714e-15 Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 89 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 541 A E ++L++ P D+L+LK + FY+G + D + ++ P+ + ++ GI +F L+E AE+ AK+ L IN D WS H + H+ + K+ ++FM+ + HN+WH AL YL L IYD HI Sbjct: 127 ACELWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDQAEKLAKEALSINPTDAWSVHTVAHIHEMKAEIKDGLEFMQH-SETFWKDSDMLACHNYWHWAL-YLIEKGEYEAALTIYDTHI 279
BLAST of CX288680 vs. ExPASy Swiss-Prot
Match: TTC38_MOUSE (Tetratricopeptide repeat protein 38 OS=Mus musculus GN=Ttc38 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 6.296e-14 Identity = 46/155 (29.68%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 89 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 541 A + ++L++ P D+L+LK + FY+G + D + +V P+ + ++ GI +F L+E A++ AK+ L I D WS H + HV + K+ ++FM++ + HN+WH AL YL L IYD+HI Sbjct: 123 ACDLWEQILRDHPTDMLALKFSHDAYFYLGYQEQMRDSVARVYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKEALSIEPTDAWSVHTVAHVHEMRAEIKDGLEFMQQ-SEGHWKDSDMLACHNYWHWAL-YLIEKGDYEAALTIYDSHI 275
BLAST of CX288680 vs. ExPASy Swiss-Prot
Match: TTC38_XENLA (Tetratricopeptide repeat protein 38 OS=Xenopus laevis GN=ttc38 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.403e-13 Identity = 48/155 (30.97%), Postives = 72/155 (46.45%), Query Frame = 2 Query: 89 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 541 A + ++L+ P DLL+LK FY+G D + +VLPY + E ++ G+ +F LLE A + AK+ L + + D WS H + HV + + FM+E + H +WH AL YL L +YDNHI Sbjct: 126 AADLWERILQSHPTDLLALKFAHDCYFYLGEQRQMRDSVARVLPYWKPETPLSSYVKGMYSFGLLETNFYDQALKVAKEALAVERTDSWSVHTIAHVHEMKADLDSGLSFMQE-TENNWKGSDMLACHVYWHWAL-YLIEKGDYEAALTLYDNHI 278
BLAST of CX288680 vs. ExPASy Swiss-Prot
Match: TTC38_XENTR (Tetratricopeptide repeat protein 38 OS=Xenopus tropicalis GN=ttc38 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13 Identity = 46/155 (29.68%), Postives = 72/155 (46.45%), Query Frame = 2 Query: 89 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPY----NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 541 A + ++L+ P DLL+LK FY+G D + +VLPY ++ G+ +F LLE A + AK+ L +++ D WS H + HV + + FM+E + H +WH AL ++E L +YDNHI Sbjct: 126 AADLWERILQNHPTDLLALKFAHDCYFYLGEQRQMRDSVARVLPYWKPGTPLSSYVKGMYSFGLLETNFYDQALKVAKEALAVDQTDSWSVHTVAHVHEMRADLDSGLAFMQE-TENNWKGSDMLACHVYWHWALYFIE-KGDYEAALTLYDNHI 278 The following BLAST results are available for this feature:
BLAST of CX288680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288680 ID=CX288680; Name=CX288680; organism=Citrus clementina; type=EST; length=541bpback to top |