CX288683

Overview
NameCX288683
Unique NameCX288683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length536
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX288683 vs. ExPASy Swiss-Prot
Match: NOSIP_DICDI (Nitric oxide synthase-interacting protein homolog OS=Dictyostelium discoideum GN=nosip PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.299e-11
Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 1 
Query:   49 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM---AVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEARDFKH 279
            + CP C   L+N+     L  CGHVFC  C DKF    +    C VC+KP  E  ++ +  GGTGF+  G  LEA+ + H
Sbjct:  251 YCCPICSKVLSNSTKTRLLKRCGHVFCS-CLDKFKEDSSSQLSCYVCDKPYTEDEIIQIHSGGTGFSGSGSNLEAKKYTH 329
The following BLAST results are available for this feature:
BLAST of CX288683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NOSIP_DICDI1.299e-1140.00Nitric oxide synthase-interacting protein homolog ... [more]
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Properties
Property NameValue
Genbank descriptionC02003B12SK IF1 Citrus clementina cDNA clone C02003B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288683 ID=CX288683; Name=CX288683; organism=Citrus clementina; type=EST; length=536bp
ACCGAAGACAAGAGTGAAGAGAAGAAATCCAGTTCTAATGATAAGTCTTT
TATCTGCCCCAGCTGCAAGGTTACCTTGACCAACACATTGTCCCTCGTGG
CCCTTAGCTCTTGTGGGCATGTCTTCTGCAAGAAATGTGCTGACAAGTTT
ATGGCCGTTGATAAGGTTTGTTTGGTGTGCAATAAGCCATGTAAAGAGAG
AAACCTGGTGAATGTGGAAAAAGGAGGGACAGGGTTTGCTGCCCATGGTG
ATCGACTGGAAGCAAGAGACTTCAAGCATTTGGGTAGTGGTTCGGGATTG
GGGCTGGTGAGACCTGCAGCCAAGACATAATACTTTTTGCTAATTCAATT
TTGTGTGAATTGCTCTTTGGCCAAAATAGGGGAAAAAAAAGGAAAAAAAA
ATTGCACTCAATGGCCCCTGCTAATGTAATTTAAATTAGCATATTCTTCA
CGTGTTGCTGTTATATTACATTATAAATATGGTTCTTGTGCAATTCTCTT
CATGTGTTGCAGTTAAAAAAAAAAAAAAAAAAAAAA
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