CX288706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288706 vs. ExPASy Swiss-Prot
Match: VPS45_ARATH (Vacuolar protein sorting-associated protein 45 homolog OS=Arabidopsis thaliana GN=VPS45 PE=1 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 1.073e-80 Identity = 145/164 (88.41%), Postives = 160/164 (97.56%), Query Frame = 1 Query: 1 FEAVTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFI 492 +EAVT+LLNNE+VSDIDRLRLVMLYALRYEK++PVQLMQLFNKLASRS KYKPGLVQFLLKQAGV+KRTGDL+GNRD +NIARNMARGLKGVENVYTQHQPLLFQTMESI +GRLRDVDYPFVG+HFQQGRPQ+V+IF+VGGTTYEESRSVAL+NA NSG+RFI Sbjct: 376 YEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPVQLMQLFNKLASRSPKYKPGLVQFLLKQAGVEKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESITRGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRSVALQNATNSGVRFI 539
BLAST of CX288706 vs. ExPASy Swiss-Prot
Match: VPS45_MOUSE (Vacuolar protein sorting-associated protein 45 OS=Mus musculus GN=Vps45 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.681e-31 Identity = 72/163 (44.17%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 10 VTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSA--KYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFI 492 V LL N V++ D +RLVMLYAL YE+ S L L L S+ KY+ LV +++ G R DL+ +D + I + +GLKGVENVYTQHQP L +T++ +IKGRL++ YP++G + RPQD+I+FI+GG TYEE+ +V N G+R + Sbjct: 370 VKRLLQNPKVTEFDAVRLVMLYALHYERHSSNSLPGLIVDLRSKGVAEKYRK-LVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFIIGGATYEEALTVYNLNRTTPGVRIV 531
BLAST of CX288706 vs. ExPASy Swiss-Prot
Match: VPS45_HUMAN (Vacuolar protein sorting-associated protein 45 OS=Homo sapiens GN=VPS45 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.972e-31 Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 10 VTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASR--SAKYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFI 492 + LL N V++ D RLVMLYAL YE+ S L L L ++ S KY+ LV +++ G R DL+ +D + I + +GLKGVENVYTQHQP L +T++ +IKGRL++ YP++G + RPQD+I+F++GG TYEE+ +V N G+R + Sbjct: 370 IKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYRK-LVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIV 531
BLAST of CX288706 vs. ExPASy Swiss-Prot
Match: VPS45_RAT (Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus GN=Vps45 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 7.799e-31 Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 10 VTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSA--KYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFI 492 V LL N V++ D +RLVMLYAL YE+ S L L L S+ KY+ LV +++ G R DL+ +D + I + +GLKGVENVYTQHQP L +T++ +IKG+L++ YP++G + RPQD+I+F++GG TYEE+ +V N G+R + Sbjct: 370 VKRLLQNPKVTEFDAVRLVMLYALHYERHSSNSLPGLIVDLRSKGVAEKYRK-LVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGKLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIV 531
BLAST of CX288706 vs. ExPASy Swiss-Prot
Match: VPS45_DICDI (Vacuolar protein sorting-associated protein 45 OS=Dictyostelium discoideum GN=vps45 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.774e-28 Identity = 67/163 (41.10%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 1 FEAVTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKP-GLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMA-RGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGI 483 + V ++N+ +D D+L LV+LY++RYE ++ +L KL+S K GL+ L AG R GDL G ++ + AR++ RGL+GV N+YTQH+PLL ++SI+K +L++ YP++ + RPQDVIIF+VGG TYEE+ +V N+ N+G+ Sbjct: 369 YNHVLEIVNDSKYTDRDKLVLVLLYSIRYEDG---RVWELKEKLSSIGIPPKEIGLIDTLRGYAGASLREGDLLGTKNIFSFARSVVKRGLQGVSNIYTQHKPLLHDILDSILKNKLKETSYPYLSTTQSRERPQDVIIFMVGGITYEEALTVYTFNSLNTGV 528
BLAST of CX288706 vs. ExPASy Swiss-Prot
Match: YAB3_SCHPO (Putative vacuolar protein sorting-associated protein C2G11.03c OS=Schizosaccharomyces pombe GN=SPAC2G11.03c PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.687e-23 Identity = 59/158 (37.34%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 34 NVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAK-YKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFVGNHFQ----QGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFI 492 N+S+ +LRL LY+LR+E+ P ++ L L + K ++ LL AG R GD++ + + AR+ +GL+GVENVY QH P L + +I+GRL++ +PF+ + + +PQD+I+ IVGG TYEE+ V+ NA G+R I Sbjct: 377 NISENTKLRLAALYSLRFERIDPAKVSALQQMLIAGGVNPLKVSVIPTLLHVAGYSFRQGDVFPPSNLFSRARSGLKGLRGVENVYIQHNPFLKSILLDLIQGRLKETTHPFLNSETRAQTSNEKPQDIIVVIVGGATYEEAHFVSEFNATQPGVRII 534 The following BLAST results are available for this feature:
BLAST of CX288706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288706 ID=CX288706; Name=CX288706; organism=Citrus clementina; type=EST; length=493bpback to top |