CX288727

Overview
NameCX288727
Unique NameCX288727
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig145 contig Ccv1_Contig145:1..552. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.267e-46
Identity = 95/177 (53.67%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +ASVLPM ++  I L + EI+AKAGPGA L  SEIA+ LP TKN DAP MLDR+LRLLAS+S++ CS+ D  D   +RLYGL  V  +   N+DGVS  P+  + QDKV M+SW  LK+AI EGG+PF++ +G  AFEY G DPRFN+VFN  M +++ + ++KIL
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLP-TKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKIL 192          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.866e-46
Identity = 94/177 (53.11%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            DE   +A QL+++SVLPM ++  I L + EI+AKAGPGA L  S+IA+ LP TKN DAP MLDR+LRLLAS+S++ CS+ D  D   +RLYGL  V  +   N+DGVS  P+  + QDKV M+SW  LK+AI EGG+PF++ +G  AFEY G DPRFN+VFN  M +++ + ++KIL
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLP-TKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKIL 191          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.049e-46
Identity = 94/177 (53.11%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +ASVLPM ++  I L + EI+AKAGPGA L  SEIA+ LP TKN DAP MLDR+LRLLAS+S++ CS+ D  D   +RLYGL  V  +   N+DGVS  P+  + QDKV M+SW  LK+AI +GG+PF++ +G  AFEY G DPRFN+VFN  M +++ + ++KIL
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLP-TKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKIL 192          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 8.613e-46
Identity = 94/177 (53.11%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            DE   +A QL+++SVLPM ++  I L + EI+AKAGPGA LP S+IA+ LP TKN +AP MLDR+LRLLAS+S++ CS+ D  D   +RLYGL  V  +   N+DGVS  P+  + QDKV M+SW  LK+AI EGG+PF++ +G  AFEY G DPRFN+VFN  M  ++ + ++KIL
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLP-TKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKIL 191          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.125e-45
Identity = 92/180 (51.11%), Postives = 126/180 (70.00%), Query Frame = 1
Query:   19 ERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +  DE+F +A QL +ASVLPM ++A + L + EI+AK+GPGA +  SE+AAQLP TKN +AP MLDRM RLLA++SV+ C++    D   +RLY L  V  +   N DGVS  P+L + QDKV M+SW  L +A+ +GGVPF++ +G   FEY G DPRFN+VFN  M ++T L ++KIL
Sbjct:   10 QTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLP-TKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKIL 188          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 3.273e-45
Identity = 92/180 (51.11%), Postives = 127/180 (70.56%), Query Frame = 1
Query:   19 ERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +  DE+F +A QL +ASVLPM +++ + L + EI+AKAGPGA +  SE+AAQLP TKN +AP MLDRMLRLLA++SV+ C++    D   +RLY L  V      N DGVS  P+L + QDKV M+SW  L +A+ +GGVPF++ +G  AFEY G DPRFN+VFN  M +++ + ++KIL
Sbjct:   10 QTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLP-TKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKIL 188          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.275e-45
Identity = 89/172 (51.74%), Postives = 126/172 (73.26%), Query Frame = 1
Query:   43 YANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +A QL TASVLP  + A I L + EI+A+AGPGA L   E+A+QLP T+N DAP MLDR+ RLLAS+SV+ C++ D  +   +RLYGL  +  + V N+DGVS  P+  + QD+VF++SW  +K+AI EGG+PF + HG  AF+YPG DPRFN++FN AM +++ ++++KIL
Sbjct:    4 FAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLP-TQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKIL 174          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.275e-45
Identity = 90/177 (50.85%), Postives = 128/177 (72.32%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A  L +ASVLPM +++ I L + E+IAKAGPGA +  SE+AAQLP T N +AP MLDR+LRLLA++SV++C +++  D   +RLYGL  V  +   N DGVS  P+L + QDKV M+SW  LK+A+ +GG+PF++ +G  AFEY G DPRFN+VFN  M N++ + ++KIL
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLP-THNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKIL 179          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.121e-44
Identity = 91/177 (51.41%), Postives = 126/177 (71.19%), Query Frame = 1
Query:   28 DESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +E+  +A QL +ASVLPM +++ + L + EIIAKAGPGA++   EIA+QLP T N DAP MLDRMLRLLA + ++ CS+    D   QRLYGL  V+ Y V N+DGVS   +  + QDKV M+SW  LK+A+ +GG+PF++ +G  AFEY G DPRFN+VFN  M +++ + ++KIL
Sbjct:   17 EEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTT-NPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKIL 192          
BLAST of CX288727 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.121e-44
Identity = 90/180 (50.00%), Postives = 128/180 (71.11%), Query Frame = 1
Query:   19 ERRDESFAYANQLVTASVLPMTMQAIIGLGVFEIIAKAGPGAKLPASEIAAQLPATKNKDAPXMLDRMLRLLASHSVVECSIDDADDS--QRLYGLNDVSNYFVPNKDGVSFGPVLALIQDKVFMDSWSQLKEAITEGGVPFDRVHGTHAFEYPGLDPRFNEVFNIAMYNYTNLVIQKIL 552
            +  +E+   A +L +ASVLPM +++ I L + E+I K+GPGA +  SE+AAQLP T+N DAP MLDR+LRLLAS+SV+ C++ D  D   +RLY L  V  +   N+DGVS   +L + QDKV M+SW  LK+A+ EGG+PF++ +G  AFEY G DPRFN+VFN  M N++ ++++KIL
Sbjct:   14 KEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLP-TQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKIL 192          
The following BLAST results are available for this feature:
BLAST of CX288727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_POPKI2.267e-4653.67Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT3_POPKI3.866e-4653.11Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPTM5.049e-4653.11Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT2_POPTM8.613e-4653.11Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_CAPCH1.125e-4551.11Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN3.273e-4551.11Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_EUCGL4.275e-4551.74Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_COFCA4.275e-4550.85Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_MEDSA2.121e-4451.41Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CATRO2.121e-4450.00Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]

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Properties
Property NameValue
Genbank descriptionC02003G01SK IF1 Citrus clementina cDNA clone C02003G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288727 ID=CX288727; Name=CX288727; organism=Citrus clementina; type=EST; length=552bp
TCGGCACGAGGGGCTAATGAAAGGAGAGACGAAAGCTTTGCATATGCCAA
TCAACTGGTGACGGCTTCAGTGCTACCCATGACAATGCAAGCAATAATTG
GGCTGGGAGTTTTTGAGATCATAGCCAAAGCTGGTCCTGGAGCAAAGCTC
CCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCACCAAGAATAAAGACGC
ACCTATNATGCTGGATCGGATGCTCAGGCTTCTGGCTAGCCATAGTGTTG
TTGAATGCTCAATTGATGATGCTGATGATTCTCAGAGACTATACGGTTTG
AATGACGTTTCCAACTACTTTGTGCCTAATAAAGATGGTGTCTCATTCGG
CCCTGTGTTGGCCTTAATTCAGGACAAGGTCTTTATGGACAGCTGGTCCC
AATTGAAAGAAGCTATTACTGAAGGAGGAGTTCCATTTGATCGAGTACAT
GGAACGCACGCTTTCGAGTATCCGGGATTGGACCCCAGGTTCAATGAAGT
TTTCAACATAGCGATGTACAACTATACCAATTTGGTCATTCAGAAAATCC
TT
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