CX288740

Overview
NameCX288740
Unique NameCX288740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11230 contig Ccv1_Contig11230:700..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SRK2E_ARATH (Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana GN=SRK2E PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 4.179e-97
Identity = 169/173 (97.69%), Postives = 173/173 (100.00%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH+MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK+ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL+VQY+IPDYVHISP
Sbjct:   76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SAPKA_ORYSJ (Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica GN=SAPK10 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 1.756e-95
Identity = 168/173 (97.11%), Postives = 170/173 (98.27%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            NI+RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDP+EPKNFRKTI RIL VQYSIPDYVHISP
Sbjct:   78 NIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIQRILGVQYSIPDYVHISP 250          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SAPK9_ORYSJ (Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica GN=SAPK9 PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 1.486e-94
Identity = 166/173 (95.95%), Postives = 170/173 (98.27%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            NI+RFKEVILTPTHLAIVMEYASGGELFERIC+AGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPE+PKNFRKTI +IL VQYSIPDYVHISP
Sbjct:   77 NIIRFKEVILTPTHLAIVMEYASGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIQKILGVQYSIPDYVHISP 249          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SRK2I_ARATH (Serine/threonine-protein kinase SRK2I OS=Arabidopsis thaliana GN=SRK2I PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 9.017e-92
Identity = 159/173 (91.91%), Postives = 170/173 (98.27%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            NIVRFKEVILTPTHLAI+MEYASGGEL+ERICNAGRFSEDEARFFFQQL+SGVSYCHSMQ+CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL++EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP+++RKTI RILSV+YSIPD + ISP
Sbjct:   77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 5.845e-91
Identity = 158/172 (91.86%), Postives = 167/172 (97.09%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHIS 516
            NI+RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS  PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEYDGK+ADVWSCGVTLYVMLVGAYPFEDP++P+NFRKTI RILSVQYSIPDYV +S
Sbjct:   59 NIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVS 230          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: AAIP_WHEAT (Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 7.633e-91
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHIS 516
            NI+RFKEV+LTPTHLAIVMEYASGGELF+RICNAGRFSEDE RFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL ++EYDGK+ADVWSCGVTLYVMLVGAYPFEDP+EP+NFRKTI RILSVQYS+PDYV +S
Sbjct:   49 NIIRFKEVVLTPTHLAIVMEYASGGELFQRICNAGRFSEDEGRFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYSVPDYVRVS 220          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SAPK8_ORYSJ (Serine/threonine-protein kinase SAPK8 OS=Oryza sativa subsp. japonica GN=SAPK8 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 1.302e-90
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            NI+RFKEVILTPTHLAIVMEYASGGELFERIC   RFSEDEAR+FFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK ADVWSCGVTLYVM+VGAYPFEDPEEPKNFRKTI RIL+VQYSIP+ V ISP
Sbjct:   88 NIIRFKEVILTPTHLAIVMEYASGGELFERICKNVRFSEDEARYFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKTADVWSCGVTLYVMVVGAYPFEDPEEPKNFRKTIQRILNVQYSIPENVDISP 260          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSI (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 1.701e-90
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHIS 516
            NIVRFKEV+LTPTHLAIVMEYA+GGELFERIC+AGRFSEDEARFFFQQLISGVSYCHSMQ+CHRDLKLENTLLDGS APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL +KEYDGK+ADVWSCGVTLYVMLVGAYPFEDP+EP+NFRKTI RILSVQY +PDYV +S
Sbjct:   59 NIVRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVS 230          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSJ (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica GN=SAPK2 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 3.788e-90
Identity = 156/172 (90.70%), Postives = 167/172 (97.09%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHIS 516
            NIVRFKEV+LTPTHLAIVMEYA+GGELFERIC+AGRFSEDEARFFFQQLISGVSYCHSMQ+CHRDLKLENTLLDGS APRLKICDFGYSKSS+LHSQPKSTVGTPAYIAPEVL +KEYDGK+ADVWSCGVTLYVMLVGAYPFEDP+EP+NFRKTI RILSVQY +PDYV +S
Sbjct:   59 NIVRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSLLHSQPKSTVGTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPDYVRVS 230          
BLAST of CX288740 vs. ExPASy Swiss-Prot
Match: SRK2D_ARATH (Serine/threonine-protein kinase SRK2D OS=Arabidopsis thaliana GN=SRK2D PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.948e-90
Identity = 154/173 (89.02%), Postives = 170/173 (98.27%), Query Frame = 1
Query:    1 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILSVQYSIPDYVHISP 519
            NIVRFKEVILTP+HLAIVMEYA+GGEL+ERICNAGRFSEDEARFFFQQLISGVSYCH+MQ+CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE+LL++EYDGK+ADVWSCGVTLYVMLVGAYPFEDP+EP+++RKTI RILSV YSIP+ +H+SP
Sbjct:   78 NIVRFKEVILTPSHLAIVMEYAAGGELYERICNAGRFSEDEARFFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEILLRQEYDGKLADVWSCGVTLYVMLVGAYPFEDPQEPRDYRKTIQRILSVTYSIPEDLHLSP 250          
The following BLAST results are available for this feature:
BLAST of CX288740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2E_ARATH4.179e-9797.69Serine/threonine-protein kinase SRK2E OS=Arabidops... [more]
SAPKA_ORYSJ1.756e-9597.11Serine/threonine-protein kinase SAPK10 OS=Oryza sa... [more]
SAPK9_ORYSJ1.486e-9495.95Serine/threonine-protein kinase SAPK9 OS=Oryza sat... [more]
SRK2I_ARATH9.017e-9291.91Serine/threonine-protein kinase SRK2I OS=Arabidops... [more]
SAPK1_ORYSJ5.845e-9191.86Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]
AAIP_WHEAT7.633e-9191.28Abscisic acid-inducible protein kinase (Fragment) ... [more]
SAPK8_ORYSJ1.302e-9093.06Serine/threonine-protein kinase SAPK8 OS=Oryza sat... [more]
SAPK2_ORYSI1.701e-9091.28Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SAPK2_ORYSJ3.788e-9090.70Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SRK2D_ARATH4.948e-9089.02Serine/threonine-protein kinase SRK2D OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC02003H04SK IF1 Citrus clementina cDNA clone C02003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288740 ID=CX288740; Name=CX288740; organism=Citrus clementina; type=EST; length=519bp
AACATAGTCAGATTCAAGGAGGTCATCTTAACTCCAACCCATCTGGCTAT
TGTGATGGAATATGCTTCCGGAGGAGAGCTCTTTGAGCGGATATGCAATG
CAGGGCGGTTCAGCGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATT
TCTGGAGTGAGCTACTGCCATTCAATGCAAGTATGCCACCGCGACTTGAA
ATTGGAGAATACATTACTGGATGGGAGTCCAGCTCCTCGTCTGAAGATTT
GTGATTTTGGATACTCTAAGTCTTCAGTACTACATTCACAGCCAAAATCA
ACTGTTGGTACTCCTGCATATATTGCCCCTGAAGTGTTGCTTAAGAAAGA
ATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGCGTGACTTTATATG
TTATGTTGGTGGGAGCATATCCTTTTGAGGATCCTGAGGAGCCAAAGAAC
TTCCGCAAGACAATACATCGAATTCTAAGTGTTCAGTACTCTATTCCGGA
TTATGTTCATATATCTCCT
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