CX288775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288775 vs. ExPASy Swiss-Prot
Match: TOCC_ARATH (Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=1 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 1.894e-79 Identity = 129/176 (73.30%), Postives = 152/176 (86.36%), Query Frame = 3 Query: 15 GERFEFQDAPSYSEKNWGGAFPXKWFWVQCNVFEGATGEVALTAGGGLRQLPVL-DSFENAAMIGIHYDGILYEFVPWNGVVSWEISQWGYWYFAAENQTHMVELKATTKYPGTTLRAPTSEAGLAPACKDTCFGELTLQLWERRYDGTKGKMILDVTSDMAALKVGGGPWFNTWK 539 GERFEF+DAPSYSEKNWGG FP KWFWVQCNVFEGATGEVALTAGGGLRQLP L +++ENAA++ +HYDG +YEFVPWNGVV WE+S WGYWY AEN+ H+VEL+A T GT LRAPT+E GLA AC+D+C+GEL LQ+WER YDG+KGK+IL+ S MAA+++GGGPWF TWK Sbjct: 278 GERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWK 453
BLAST of CX288775 vs. ExPASy Swiss-Prot
Match: TOCC_MAIZE (Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 1.270e-75 Identity = 120/179 (67.04%), Postives = 151/179 (84.36%), Query Frame = 3 Query: 3 IRHEGERFEFQDAPSYSEKNWGGAFPXKWFWVQCNVFEGATGEVALTAGGGLRQLPVLDSFENAAMIGIHYDGILYEFVPWNGVVSWEISQWGYWYFAAENQTHMVELKATTKYPGTTLRAPTSEAGLAPACKDTCFGELTLQLWERRYDGTKGKMILDVTSDMAALKVGGGPWFNTWK 539 I +GERFEF++APSYSEKNWGG FP KW+W+QCNVF GA+GEV+LTA GGLR++ + D++E+ ++IGIHY+G +EFVPW G VSW+I WG W + EN+TH+VE++ATT GT LRAPT EAGL PACKDTC+G+L LQLWE++YDG+KG+MILD TS+MAAL+VGGGPWFN WK Sbjct: 263 IEWDGERFEFENAPSYSEKNWGGGFPRKWYWIQCNVFPGASGEVSLTAAGGLRKIGLGDTYESPSLIGIHYEGQFFEFVPWTGTVSWDIGLWGLWKMSGENKTHLVEIEATTAESGTALRAPTIEAGLVPACKDTCYGDLRLQLWEKKYDGSKGEMILDATSNMAALEVGGGPWFNGWK 441 The following BLAST results are available for this feature:
BLAST of CX288775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288775 ID=CX288775; Name=CX288775; organism=Citrus clementina; type=EST; length=539bpback to top |