CX288777

Overview
NameCX288777
Unique NameCX288777
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length567
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:915..1481. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 7.078e-99
Identity = 176/188 (93.62%), Postives = 183/188 (97.34%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD+VVVLWTANTERYSNV+VGLNDT+ENL AS+D+NEAEISPSTLYAIAC+LEN+PFINGSPQNTFVPGLIDLAI RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  215 EFKEKNKVDKVVVLWTANTERYSNVVVGLNDTMENLFASVDRNEAEISPSTLYAIACILENVPFINGSPQNTFVPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 9.244e-99
Identity = 176/188 (93.62%), Postives = 183/188 (97.34%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD+VVVLWTANTERYSNV+VGLNDT ENL++SLDK+EAEISPSTLYAIACVLEN+PFINGSPQNTFVPGLI+LAI RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV SNGILY PGEHPDHVVVIKYVP VGDSKRAMDEY
Sbjct:  215 EFKEKNKVDKVVVLWTANTERYSNVVVGLNDTTENLMSSLDKDEAEISPSTLYAIACVLENVPFINGSPQNTFVPGLIELAIKRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVGSNGILYEPGEHPDHVVVIKYVPCVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 1.577e-98
Identity = 175/188 (93.09%), Postives = 183/188 (97.34%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD+VVVLWTANTERYSNV+VGLNDT+ENL AS+D+NEAEISPSTLYAIAC+LEN+PFINGSPQNTFVPGLIDLAI +N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  215 EFKEKNKVDKVVVLWTANTERYSNVVVGLNDTMENLFASVDRNEAEISPSTLYAIACILENVPFINGSPQNTFVPGLIDLAIKKNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 3.513e-98
Identity = 176/188 (93.62%), Postives = 181/188 (96.28%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD+VVVLWTANTERYSNV VGLNDT ENLLAS+DKNEAEISPSTLYAIACV+E +PFINGSPQNTFVPGLIDLAI  +CLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  215 EFKEKNKVDKVVVLWTANTERYSNVSVGLNDTTENLLASVDKNEAEISPSTLYAIACVMEGVPFINGSPQNTFVPGLIDLAIKNDCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.022e-97
Identity = 173/188 (92.02%), Postives = 185/188 (98.40%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD++VVLWTANTERYS+V+VGLNDT+ENLLAS++KNE+EISPSTLYAIACVLE IPFINGSPQNTFVPGLI+LAI +NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  215 EFKEKNKVDKLVVLWTANTERYSDVVVGLNDTMENLLASVEKNESEISPSTLYAIACVLEGIPFINGSPQNTFVPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 355.525 bits (911), Expect = 1.022e-97
Identity = 173/188 (92.02%), Postives = 180/188 (95.74%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD++VVLWTANTERYSNV  GLNDT+ENLLAS+DKNEAE+SPSTLYAIACV+E +PFINGSPQNTFVPGLIDLAI  NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQ FRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  215 EFKEKNKVDKIVVLWTANTERYSNVCAGLNDTMENLLASVDKNEAEVSPSTLYAIACVMEGVPFINGSPQNTFVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQAFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 354.369 bits (908), Expect = 2.277e-97
Identity = 176/188 (93.62%), Postives = 181/188 (96.28%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEK+KVD+VVVLWTANTERYSNV VGLNDT+ENLLAS+DKNEAEISPSTLYAIACV+E IPFINGSPQNTFVPGLIDLAI  NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY  GEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  215 EFKEKSKVDKVVVLWTANTERYSNVCVGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 3.884e-97
Identity = 173/188 (92.02%), Postives = 182/188 (96.81%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD+VVVLWT NTERYSNV+VGLNDT+ENLLASL+KNE+EISPST YA+AC+ ENIPFINGSPQNTFVPGLIDLAI +N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGILY PGEHPDHVVVIKYVPYVGDSKRAMDEY
Sbjct:  217 EFKEKNKVDKVVVLWTGNTERYSNVVVGLNDTMENLLASLEKNESEISPSTSYALACIEENIPFINGSPQNTFVPGLIDLAIKKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILYEPGEHPDHVVVIKYVPYVGDSKRAMDEY 404
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 353.214 bits (905), Expect = 5.072e-97
Identity = 173/188 (92.02%), Postives = 183/188 (97.34%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            EFKEKNKVD++VVLWTANTERYSNVIVGLNDT ENLLAS++K+E+EISPSTLYAIACVLE IPFINGSPQNTFVPGLI+LAI +NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMDEY
Sbjct:  215 EFKEKNKVDKLVVLWTANTERYSNVIVGLNDTTENLLASVEKDESEISPSTLYAIACVLEGIPFINGSPQNTFVPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMDEY 402
[Close]
BLAST of CX288777 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 5.072e-97
Identity = 171/188 (90.96%), Postives = 183/188 (97.34%), Query Frame = 3 
Query:    3 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIXRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEY 566
            +FKE+NKVD+VVVLWTANTERYSNV+VGLNDT E+L+AS+++NEAEISPSTLYAIACV EN+PFINGSPQNTFVPGLIDLAI RN LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGILY PGEHPDH+VVIKYVPYVGDSKRAMDEY
Sbjct:  215 DFKEQNKVDKVVVLWTANTERYSNVVVGLNDTAESLMASVERNEAEISPSTLYAIACVFENVPFINGSPQNTFVPGLIDLAIQRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILYEPGEHPDHIVVIKYVPYVGDSKRAMDEY 402
The following BLAST results are available for this feature:
BLAST of CX288777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_TOBAC7.078e-9993.62Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO3_ARATH9.244e-9993.62Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_NICPA1.577e-9893.09Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_HORVU3.513e-9893.62Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_WHEAT1.022e-9792.02Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_MAIZE1.022e-9792.02Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ORYSJ2.277e-9793.62Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_MESCR3.884e-9792.02Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO2_ARATH5.072e-9792.02Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_SESIN5.072e-9790.96Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02004C08SK IF1 Citrus clementina cDNA clone C02004C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288777 ID=CX288777; Name=CX288777; organism=Citrus clementina; type=EST; length=567bp
GAGAGTTTAAGGAGAAAAACAAGGTGGATAGGGTTGTTGTACTGTGGACT
GCTAACACTGAGAGGTACAGTAATGTGATTGTCGGGCTAAATGACACAGT
GGAGAACCTTCTTGCTTCACTGGACAAAAACGAAGCTGAGATTTCTCCTT
CCACCTTGTATGCTATTGCTTGTGTTCTTGAAAATATCCCTTTCATCAAT
GGAAGCCCCCAAAACACCTTTGTACCAGGGCTTATTGACTTGGCTATTAN
GAGGAACTGTTTGATTGGTGGAGATGACTTCAAGAGTGGGCAGACTAAGA
TGAAATCTGTTTTGGTTGATTTCCTTGTTGGGGCAGGAATCAAGCCAACA
TCAATTGTTAGCTACAACCACTTGGGAAACAATGATGGAATGAATCTTTC
AGCTCCTCAAACCTTCCGCTCCAAGGAGATTTCCAAAAGTAATGTTGTTG
ATGACATGGTCTCCAGCAATGGTATTCTTTATGGGCCTGGTGAACACCCC
GACCACGTTGTGGTCATCAAGTATGTGCCATATGTTGGCGATAGCAAGAG
AGCCATGGATGAGTACA
back to top