CX288820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 3.037e-90 Identity = 164/176 (93.18%), Postives = 172/176 (97.73%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 529 FQ+YLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR E + VTM HF++AIDRVIGGLEKKN+VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+G+ISTGAQNDLEKVTKMTYAQVAV Sbjct: 507 FQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAV 682
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 5.180e-90 Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 529 F++YLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAAR E + VTM HFE+AIDRVIGGLEKKN+VISKLERRTVAYHESGHAV GWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+GKISTGAQNDLEKVTKMTYAQVAV Sbjct: 501 FKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAV 676
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 1.154e-89 Identity = 160/176 (90.91%), Postives = 174/176 (98.86%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 529 F++YLKK+KLD+EPS+YSQRLAALTPGFAGADIANVCNEAALIAAR E +Q+TM+HFE+AIDR+IGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAE+VL+G+ISTGAQNDLEKVTKMTYAQVAV Sbjct: 515 FRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVLIGRISTGAQNDLEKVTKMTYAQVAV 690
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 9.769e-89 Identity = 160/176 (90.91%), Postives = 172/176 (97.73%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 529 F++YLKK+KLD EPS+YSQRLAALTPGFAGADIANVCNEAALIAAR E + +TM+HFE+AIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN+NLL+TKEQLFDMTCMTLGGRAAE+VL+GKISTGAQNDLEKVTKMTYAQVAV Sbjct: 500 FRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQLFDMTCMTLGGRAAEEVLIGKISTGAQNDLEKVTKMTYAQVAV 675
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 3.065e-58 Identity = 108/176 (61.36%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 2 FQVYLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+V+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ Sbjct: 487 FKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG-KGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQI 661
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 6.828e-58 Identity = 108/176 (61.36%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 2 FQVYLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+V+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ Sbjct: 486 FKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG-KGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQI 660
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 6.828e-58 Identity = 107/176 (60.80%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 2 FQVYLKKIKLDH--EPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+V+L+ +KLD E +++LA+LTPGF+GAD+ANVCNEAALIAAR + + +HFE AI+RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L T+EQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ Sbjct: 488 FKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG-KGLGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQI 662
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 1.987e-57 Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSY--YSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+V+L+ +KLD S S++LAALTPGF GADI+NVCNEAALIAAR + V HFE AI+RVIGGLEKK +V+ E+ TVAYHE+GHAV GWFLEHA+PLLKV+I+PRG LG+AQY+P E L T+EQLFD CM LGGR AEQ+ G+I+TGAQ+DL KVT+ YAQ+ Sbjct: 479 FKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRG-KGLGYAQYLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQI 653
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 3.877e-53 Identity = 99/174 (56.90%), Postives = 132/174 (75.86%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+ +LK +KL S+YSQRLA LTPGF+GADIAN+CNEAAL AAR ++ V +FE A++RVI G KK+K++SK E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P + L TKEQLF+ CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V Sbjct: 489 FEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMV 662
BLAST of CX288820 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 5.599e-52 Identity = 96/174 (55.17%), Postives = 132/174 (75.86%), Query Frame = 2 Query: 2 FQVYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQV 523 F+ +LK +KL ++YSQRLA LTPGF+GADIAN+CNEAAL AAR ++ V +FE A++RV+ G KK+K++SK E++ VA+HESGHA+ GW LEH E ++KV+I PR AALGFAQ +P + L TKEQLF+ CM LGGRA+E + ++++GAQ+DL KVT++ Y+ V Sbjct: 489 FEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMV 662 The following BLAST results are available for this feature:
BLAST of CX288820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288820 ID=CX288820; Name=CX288820; organism=Citrus clementina; type=EST; length=531bpback to top |