CX288823

Overview
NameCX288823
Unique NameCX288823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13435 contig Ccv1_Contig13435:431..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.414e-90
Identity = 150/207 (72.46%), Postives = 174/207 (84.06%), Query Frame = 3
Query:    3 TREHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV---NNHKEHEQVLERYGSKAEFY 614
            T E  HA+EAIKWGTDYFIKAHT P+VLW EVGDGDTDHYCWQRPEDMTTSRRA+K+DE NPGSD+AGET       SIVFR  NPHYSHLLLHHAQQLFEFGDKYRGKYD S++VVK YY SVSGYMDELLW A WLY+ATDNE Y+ YV+D A + GG++WA++EFSWDVK+AGVQ++ASM+     HK+H +VL++Y SKA+ Y
Sbjct:  121 TGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHY 327          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN16_ORYSJ (Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 8.037e-86
Identity = 150/203 (73.89%), Postives = 162/203 (79.80%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQ----VLERYGSKAEFY 614
            HA++AIKWGTDYFIKAHT PH LW EVGDGDTDHYCWQRPEDMTTSR+AYKVD R PGSDVAGET       SIVFR+ NPHYSHLLLHHAQQLFEF D YRGKYDSSI  VK YY SVSGY DELLWAA+WL++AT   AYL Y +DNAD FGG  WAITEFSWDVKYAGVQI+A+ +    EHE+     LERY  KAE Y
Sbjct:  117 HALDAIKWGTDYFIKAHTKPHELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRRRPGSDVAGETAAAMAAASIVFRQSNPHYSHLLLHHAQQLFEFADTYRGKYDSSIAEVKSYYASVSGYHDELLWAALWLHRATGRAAYLDYAVDNADEFGGTGWAITEFSWDVKYAGVQILAARLLMRGEHEERHRGTLERYREKAEHY 319          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 1.516e-84
Identity = 144/207 (69.57%), Postives = 164/207 (79.23%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV-----NNHKEHEQVLERYGSKAEFY 614
            E  HA+EAIKWGTDYF+KAHTHP V W EVGDGDTDHYCWQRPEDMTTSR+AY+VD  NPGSD+AGET       SIVFR+ +PHYSHLLLHHAQQLFEFGD YRG YDSSIE V+ YY SVSGY DELLWAA+WL++AT  E YL+Y +DNAD FGG+ WAITEFSWDVKYAG+Q++A+ +          H  VLE+Y  KAE Y
Sbjct:  139 EWRHALEAIKWGTDYFVKAHTHPFVYWAEVGDGDTDHYCWQRPEDMTTSRQAYRVDRDNPGSDLAGETAAALAAASIVFRRSDPHYSHLLLHHAQQLFEFGDTYRGSYDSSIEEVRSYYASVSGYHDELLWAALWLHRATGKEEYLRYAVDNADSFGGVGWAITEFSWDVKYAGLQVLAAKLLLDGDPQAAAHRGVLEKYREKAEHY 345          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN7_ORYSJ (Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.283e-83
Identity = 148/203 (72.91%), Postives = 162/203 (79.80%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQ----VLERYGSKAEFY 614
            HA+EAIKWGTDYFIKAHT P+ LW EVGDGDTDHYCWQRPEDMTTSR+AYKVD   PGSDVAGET       SIVFRK NPHY+ LLLHHAQQLFEF DKYRGKYDSSI  VK YY SVSGY DELLWAA+WL++AT    YL YV+DNAD FGG  WAITEFSWDVKYAGVQI+A+ +    EHE+     LE+Y +KAE Y
Sbjct:  123 HALEAIKWGTDYFIKAHTKPNELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRERPGSDVAGETAAAMAAASIVFRKSNPHYASLLLHHAQQLFEFADKYRGKYDSSIAEVKSYYASVSGYKDELLWAALWLHRATGKAHYLDYVVDNADCFGGTGWAITEFSWDVKYAGVQILAARLLLRGEHEERHRSTLEQYRAKAEHY 325          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN5_ORYSJ (Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.161e-82
Identity = 139/205 (67.80%), Postives = 165/205 (80.49%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKL-NPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEH-----EQVLERYGSKAEFY 614
            HA+ AIKWGTDYFIKAHTHP+VLW +VGDGD+DHYCWQRPEDMTTSR AYKVD  NPGS+VA ET       SIVFR+  + HY+HLLLHHAQQLFEFGDKYRG+YD S+EVVK YYPS SGY DELLWAA+WL++AT    YL Y +DNAD FGG  WA++EFSWD+KYAG+Q++AS +   ++H      +VLE+Y SKAE+Y
Sbjct:  116 HALHAIKWGTDYFIKAHTHPNVLWTQVGDGDSDHYCWQRPEDMTTSRHAYKVDAENPGSEVAAETAAAMAAASIVFRRAGDAHYAHLLLHHAQQLFEFGDKYRGRYDESVEVVKNYYPSSSGYKDELLWAALWLHRATGRREYLDYAVDNADDFGGTGWAVSEFSWDIKYAGLQVLASKLLVEEKHLSSQQREVLEKYRSKAEYY 320          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.773e-76
Identity = 134/207 (64.73%), Postives = 154/207 (74.40%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMV-----NNHKEHEQVLERYGSKAEFY 614
            E  H +EAIKWGTDY +KAHT    LW EVGDGDTDHYCWQRPEDMTTSR+AYKVD  NPGSDVAGET       SIVFR+  P YS LLL HA+QLF+FGD+YRGKYDSSI  V+ YY SVSGY DELLWAA+WL++AT    YL Y +  AD  GG+ WA+TEFSWDVKYAG+QI+A+ V     ++   H   LE+Y SKAE Y
Sbjct:  120 ERRHVLEAIKWGTDYLVKAHTAADELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDNPGSDVAGETAAALAAASIVFRRSKPRYSRLLLRHAEQLFDFGDRYRGKYDSSIGEVRAYYASVSGYGDELLWAALWLHRATGRRGYLDYAVAMADELGGVGWAVTEFSWDVKYAGLQILAAKVLMDGGDHPAAHAATLEQYRSKAEHY 326          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.922e-71
Identity = 128/200 (64.00%), Postives = 148/200 (74.00%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS---MVNNHKEHEQVLERYGSKAE 608
            HAI+A+KWGTDYFIKAH  P+VL+ EVGDG +DHYCWQRPE+MTT RRAYK+D  NPGSD+AGET       SIVFR+ +P YS  LL HA QLFEF DKYRGKYDSSI V + YY SVSGY DELLWAA WLY+AT+++ YL Y+  N D  GG  W++TEF WDVKYAGVQ + +   M     EH  V ERY  KAE
Sbjct:  113 HAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSDHYCWQRPEEMTTDRRAYKIDRNNPGSDLAGETAAAMAAASIVFRRSDPSYSAELLRHAHQLFEFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYQATNDKYYLDYLGKNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKVLMQGKGGEHTAVFERYQQKAE 312          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN2_ORYSJ (Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.377e-69
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS---MVNNHKEHEQVLERYGSKAEFY 614
            HA+EAIKWGTDYF KAH  P+VL+ EVGDGD+DH CWQRPEDMTTSR+AY++D +NPGSD+AGET       S+VFR  NP Y+  LL H++QLF+F DKYRG+YD+SI V + YY S SGY DELLWA+ WLY+A+D+  YL Y+ +NAD  GG  W+I +F WDVKY GVQI+A+   +     EH  VL+ Y  KA+F+
Sbjct:  127 HAVEAIKWGTDYFAKAHPEPNVLYAEVGDGDSDHNCWQRPEDMTTSRQAYRLDPQNPGSDLAGETAAAMAAASLVFRSSNPGYADQLLQHSKQLFDFADKYRGRYDNSITVARNYYGSFSGYGDELLWASAWLYQASDDRRYLDYLANNADALGGTGWSINQFGWDVKYPGVQILAAKFLLQGKAGEHAGVLQGYRRKADFF 328          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN6_ARATH (Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.068e-69
Identity = 123/202 (60.89%), Postives = 149/202 (73.76%), Query Frame = 3
Query:   18 HAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS---MVNNHKEHEQVLERYGSKAEFY 614
            ++I+AIKWGTDYFIKAH  P+VL+ EVGDG+TDHYCWQRPE+MTT R+AY++D  NPGSD+AGET       SIVFR+ NP YS LLL HA QLF+F DKYRGKYDSSI V + YY SVSGY DELLWAA WLY+A++N+ YL Y+  N D  GG  W++TEF WDVKYAGVQ + +   M      H  V  +Y  KA+ +
Sbjct:  112 NSIDAIKWGTDYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPVYSRLLLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYQASNNQFYLDYLGRNGDAMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHAPVFRKYQEKADSF 313          
BLAST of CX288823 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 6.398e-67
Identity = 117/205 (57.07%), Postives = 151/205 (73.66%), Query Frame = 3
Query:    9 EHHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIAS---MVNNHKEHEQVLERYGSKAEFY 614
            E  +A++A+KWGTDYFIKAH  P VL+ EVGDGDTDH CWQRPEDMTTSR+A++VD ++PGSD+A ET       SIVFR   P Y++LLL H++QLFEF DKYRGKYD+SI V + YY S SGY DELLWAA WL++AT++ +YL+Y+  N +  GG  W+I +F WDVKY GVQ++A+   +     +H   L+RY   AEF+
Sbjct:  118 ELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGDELLWAAAWLFEATEDRSYLEYLAGNGEALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFF 322          
The following BLAST results are available for this feature:
BLAST of CX288823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN11_ARATH2.414e-9072.46Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32... [more]
GUN16_ORYSJ8.037e-8673.89Endoglucanase 16 OS=Oryza sativa subsp. japonica G... [more]
GUN22_ORYSJ1.516e-8469.57Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN7_ORYSJ1.283e-8372.91Endoglucanase 7 OS=Oryza sativa subsp. japonica GN... [more]
GUN5_ORYSJ3.161e-8267.80Endoglucanase 5 OS=Oryza sativa subsp. japonica GN... [more]
GUN21_ORYSJ5.773e-7664.73Endoglucanase 21 OS=Oryza sativa subsp. japonica G... [more]
GUN19_ARATH1.922e-7164.00Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11... [more]
GUN2_ORYSJ1.377e-6959.41Endoglucanase 2 OS=Oryza sativa subsp. japonica GN... [more]
GUN6_ARATH3.068e-6960.89Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g643... [more]
GUN15_ORYSJ6.398e-6757.07Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionC02004G09SK IF1 Citrus clementina cDNA clone C02004G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288823 ID=CX288823; Name=CX288823; organism=Citrus clementina; type=EST; length=616bp
GCACGAGGGAGCATCATCATGCAATTGAGGCCATCAAGTGGGGAACTGAT
TATTTCATCAAAGCTCACACTCACCCTCATGTATTATGGGTTGAGGTGGG
TGATGGAGACACCGATCACTACTGTTGGCAGCGGCCGGAAGACATGACGA
CGTCGCGGCGTGCTTACAAAGTAGACGAGAGAAACCCCGGCTCGGATGTC
GCCGGAGAGACGGCAGCGGCAATGGCGGCAGCATCAATTGTGTTTAGGAA
ACTAAACCCACATTACTCTCACCTACTATTGCACCACGCGCAACAGTTGT
TTGAGTTTGGTGACAAGTACAGAGGGAAATACGACAGTAGTATAGAGGTA
GTGAAGGGGTACTATCCGTCGGTTAGTGGATACATGGACGAGTTGTTATG
GGCGGCTGTGTGGCTATACAAGGCAACCGACAACGAGGCGTATTTGAAGT
ACGTGCTTGATAATGCCGATCGTTTTGGTGGGATCACTTGGGCCATTACT
GAATTTAGCTGGGATGTTAAGTACGCTGGCGTTCAAATCATCGCTTCAAT
GGTGAATAATCACAAGGAACACGAGCAAGTTCTTGAACGATACGGTTCGA
AAGCTGAATTTTATCT
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