CX288829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288829 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 3.824e-58 Identity = 117/179 (65.36%), Postives = 135/179 (75.42%), Query Frame = 3 Query: 6 SRKVDDDLYRAIDIYLKAHPNLDEIEREKICSSMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGLDNDRS-----TPDAAXTRNQLQADVSLIKENEALRSELTRMKLYISDMQKGNN--QAXXXXXXXXXXXXXXXXXFFSSMSKTFGKLNPFKHGSKDTSNIDDDVAAM 521 +RK DDDLYRAIDI+LKAHPNLDEIEREK+CSSMDPLKLSY+AR+HASQNKRLPV IVLHALYYDQLKLRSG+ P+A TR+QLQAD +L KENEALRSEL +MK+Y+SDMQK N A FFSS+SK GKLNPFK+GSKDTS+ID+D+ + Sbjct: 402 ARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYDQLKLRSGVAEQEERAVVVLPEALKTRSQLQADTTLAKENEALRSELMKMKMYVSDMQKNKNGAGASSSNSSSLVSSKKSKHTFFSSVSKKLGKLNPFKNGSKDTSHIDEDLGGV 580
BLAST of CX288829 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.882e-21 Identity = 63/181 (34.81%), Postives = 95/181 (52.49%), Query Frame = 3 Query: 6 SRKVDDDLYRAIDIYLKAHPNLDEIEREKICSSMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGLDNDRSTPDAAXTRNQLQA-----------------DVSLIKENEALRSELTRMKLYISDMQKGNNQAXXXXXXXXXXXXXXXXXFFSSMSKTFGKLNPFKHGSKDTSN 497 +R + D LYRAID+YLKAH L + +++K+ +D KLS EA HA+QN+RLP+Q ++ LY++QLKLRS L + S + + Q Q+ SL +EN L+ EL R+++ ++D++K + F SS SK GKL+ F H S S+ Sbjct: 417 ARTLHDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLELARLRMRLNDLEKEH------ICMKRDMQRSHSRKFMSSFSKKMGKLSFFGHSSSRGSS 591
BLAST of CX288829 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16 Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 6 SRKVDDDLYRAIDIYLKAHPNLDEIEREKICSSMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGL 224 +R +DD LYRAIDIYLK HP L E ERE +C +D KLS EA HA+QN+RLP++I++ L+++QL+LR+ + Sbjct: 441 ARLLDDGLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQLQLRTSV 513
BLAST of CX288829 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16 Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 3 Query: 6 SRKVDDDLYRAIDIYLKAHPNLDEIEREKICSSMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGLDN 230 +R DD LYRAID YLKAHP L E ER+++C MD KLS +A +HA+QN+RLP+++V+ L+ +Q+K+ + L N Sbjct: 537 ARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVKISNALAN 611
BLAST of CX288829 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16 Identity = 37/73 (50.68%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 6 SRKVDDDLYRAIDIYLKAHPNLDEIEREKICSSMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGL 224 +R DD LYRA+D YLKAHP L E ER+++C MD KLS++A +HA+QN+RLP+++V+ L+ +Q+K+ + L Sbjct: 540 ARACDDGLYRAVDSYLKAHPTLTEHERKRLCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLFTEQVKISNAL 612 The following BLAST results are available for this feature:
BLAST of CX288829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288829 ID=CX288829; Name=CX288829; organism=Citrus clementina; type=EST; length=523bpback to top |