CX288830

Overview
NameCX288830
Unique NameCX288830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 5.774e-90
Identity = 157/185 (84.86%), Postives = 174/185 (94.05%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            IVY G+L D +KVAVKNLLNNRGQAE+EFKVEVE IGRVRHKNLVRLLGYC EGA+RMLVY++V+NGNLEQW+HGDVG  SPLTW+IRMNIILG AKGL+YLHEGLEPKVVHRDIKSSNIL+D+ WN KVSDFGLAKLLGSESSY+TTRVMGTFGYVAPEYA TGMLNE+SD+YSFGILIME+I+
Sbjct:  167 IVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIIT 351          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 6.853e-75
Identity = 135/185 (72.97%), Postives = 158/185 (85.41%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY G L + ++VAVK LLNN GQAE+EF+VEVEAIG VRHKNLVRLLGYC EG HRMLVYEYVN+GNLEQWLHG +     LTWE RM II GTA+ L+YLHE +EPKVVHRDIK+SNILID  +N K+SDFGLAKLL S  S+ITTRVMGTFGYVAPEYA+TG+LNE+SD+YSFG+L++E I+
Sbjct:  196 VVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAIT 380          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.439e-48
Identity = 88/185 (47.57%), Postives = 128/185 (69.19%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY     D SK AVK L  + GQ EREF+ EVEA+ R  HKNLV L GYC  G  R+L+Y ++ NG+L+ WLH  V     L W++R+ I  G A+GL+YLH+  EP V+HRD+KSSNIL+D+ +   ++DFGLA+LL    +++TT ++GT GY+ PEY+ + +   R DVYSFG++++E+++
Sbjct:  767 LVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVT 951          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.078e-47
Identity = 84/184 (45.65%), Postives = 123/184 (66.85%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY   L     VAVK L   + Q  REF  E+E +G+V+H NLV LLGYC+    ++LVYEY+ NG+L+ WL    G    L W  R+ I +G A+GL++LH G  P ++HRDIK+SNIL+D  + PKV+DFGLA+L+ +  S+++T + GTFGY+ PEY  +     + DVYSFG++++E+++
Sbjct:  931 VYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVT 1114          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 95/186 (51.08%), Postives = 131/186 (70.43%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLG-SESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY+G L D+ +VAVK L  +  Q  +EFK EVE + RV H NLV L+GYC E AH  L+YEY+ NG+L+  L G  G C  L WE R++I + TA GL YLH G +P +VHRD+KS NIL+D+H+  K++DFGL++     E S+++T V+GT GY+ PEY  T  L E+SDVYSFGI+++E+I+
Sbjct:  586 VVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDC-VLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIIT 770          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.045e-47
Identity = 95/184 (51.63%), Postives = 126/184 (68.48%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G L D  +VAVK L     Q + +F  E+ AI  V+H+NLV+L G C EG HR+LVYEY+ NG+L+Q L G+      L W  R  I LG A+GL YLHE    ++VHRD+K+SNIL+D    PKVSDFGLAKL   + ++I+TRV GT GY+APEYA  G L E++DVY+FG++ +E++S
Sbjct:  707 VYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGE--KTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVS 888          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.347e-46
Identity = 92/187 (49.20%), Postives = 135/187 (72.19%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKL--LGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY+G + DN +VAVK L  +  Q  ++FK EV+ + RV H NLV L+GYC EG H +L+YEY++NGNL+Q L G+    SPL+WE R+ I   TA+GL YLH G +P ++HRDIKS NIL+D ++  K+ DFGL++   +GSE ++++T V G+ GY+ PEY  T  L E+SDV+SFG++++E+I+
Sbjct:  604 VVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGE-NSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSE-THVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIIT 788          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.347e-46
Identity = 95/184 (51.63%), Postives = 124/184 (67.39%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G L D   VAVK L     Q + +F  E+ AI  V H+NLV+L G C EG HRMLVYEY+ NG+L+Q L GD      L W  R  I LG A+GL YLHE    ++VHRD+K+SNIL+D    P++SDFGLAKL   + ++I+TRV GT GY+APEYA  G L E++DVY+FG++ +E++S
Sbjct:  708 VYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGD--KTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVS 889          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 185.267 bits (469), Expect = 1.759e-46
Identity = 84/185 (45.41%), Postives = 126/185 (68.11%), Query Frame = 2
Query:    2 IVYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            +VY   L D  KVA+K L  + GQ EREF+ EVE + R +H NLV L G+C     R+L+Y Y+ NG+L+ WLH      + L W+ R+ I  G AKGL YLHEG +P ++HRDIKSSNIL+D+++N  ++DFGLA+L+    ++++T ++GT GY+ PEY    +   + DVYSFG++++E+++
Sbjct:  747 MVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT 931          
BLAST of CX288830 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.759e-46
Identity = 93/185 (50.27%), Postives = 129/185 (69.73%), Query Frame = 2
Query:    5 VYYGLLEDNSKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLSYLHEGLEPKVVHRDIKSSNILIDKHWNPKVSDFGLAKLLGS-ESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 556
            VY G   +  +VAVK L    GQ + EFK EV  + R++HKNLV+LLG+C EG   +LVYE+V N +L+ ++  D    S LTWE+R  II G A+GL YLHE  + K++HRD+K+SNIL+D   NPKV+DFG A+L  S E+   T R+ GT GY+APEY + G ++ +SDVYSFG++++E+IS
Sbjct:  362 VYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIF-DEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 545          
The following BLAST results are available for this feature:
BLAST of CX288830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1154_ARATH5.774e-9084.86Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH6.853e-7572.97Probable receptor-like protein kinase At2g42960 OS... [more]
PSKR2_ARATH1.439e-4847.57Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
EXS_ARATH2.078e-4745.65Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5169_ARATH3.544e-4751.08Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH6.045e-4751.63Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH1.347e-4649.20Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH1.347e-4651.63Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH1.759e-4645.41Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK40_ARATH1.759e-4650.27Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC02004H06SK IF1 Citrus clementina cDNA clone C02004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288830 ID=CX288830; Name=CX288830; organism=Citrus clementina; type=EST; length=556bp
GATTGTTTATTATGGTCTTTTGGAGGATAACTCTAAGGTTGCTGTCAAAA
ACTTGCTCAATAACAGGGGACAAGCTGAAAGGGAGTTTAAGGTTGAAGTG
GAAGCAATTGGGCGTGTTCGACACAAGAATTTAGTGAGATTGCTTGGCTA
TTGTGCTGAGGGAGCTCATAGGATGCTTGTATATGAGTATGTGAATAATG
GAAACTTGGAACAATGGCTTCATGGGGATGTAGGGCCTTGCAGTCCTCTT
ACATGGGAGATTCGAATGAATATTATCTTAGGGACAGCAAAGGGATTGAG
TTATTTGCATGAGGGACTTGAACCCAAAGTTGTTCACCGTGATATAAAAT
CAAGCAACATTTTAATTGATAAGCATTGGAACCCCAAGGTTTCAGACTTT
GGCCTTGCCAAGCTCCTTGGATCAGAGAGCAGCTACATTACAACCCGTGT
GATGGGAACATTTGGCTATGTAGCTCCTGAATATGCAAGTACGGGTATGT
TAAATGAAAGAAGTGATGTGTATAGTTTTGGAATTCTTATAATGGAAGTA
ATTTCT
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