CX288837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5) HSP 1 Score: 106.301 bits (264), Expect = 1.227e-22 Identity = 62/179 (34.64%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 92 TRKITDKLKSGFSS---FFTLFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKD------NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 T ++ K+G S L S L +TT+LLW ++ AFSYYG VL T+ L +C + + S Y D+ T+ AE PGLI++ +I++ GRK +M L + + IF L F TVL+F R +G A +Y PE+YPT+ R G G SA+ R Sbjct: 290 TGRLVSSTKAGSESRGDIANLLSPDLRKTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMAR 468
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.227e-22 Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 143 LFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG---------SKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 LF+ TTLLLW ++F+NAFSYYG VLLT++L CG +K A + Y+D+ T+ +E PG++++ I+D++GRK +M L FV+ L L V T+LLF R +G A +Y PE+YPT+ R G G S + R Sbjct: 308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMAR 469
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.227e-22 Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 143 LFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG---------SKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 LF+ TTLLLW ++F+NAFSYYG VLLT++L CG +K A + Y+D+ T+ +E PG++++ I+D++GRK +M L FV+ L L V T+LLF R +G A +Y PE+YPT+ R G G S + R Sbjct: 308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMAR 469
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.093e-22 Identity = 62/162 (38.27%), Postives = 87/162 (53.70%), Query Frame = 2 Query: 143 LFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG-SKVLHADKSKDNSL--------YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 LFS + TTLLLW ++F+NAFSYYG VLLT++L C S A K K + Y D+ T+ +E PGL+++ I+D++GRK +M + F++ L L V TV LF R +G A +Y PE+YPT+ R G G S + R Sbjct: 308 LFSPQFRCTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISNQRKAVKPKCSLACEYLTVEDYTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTVFLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMAR 469
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.090e-22 Identity = 59/162 (36.42%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 143 LFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG---------SKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 LF+ TTLLLW ++F+NAFSYYG VLLT++L C +K A + Y+D+ T+ +E PG++++ ++D++GRK +M L FV+ + L L V T+LLF R +G A +Y PE+YPT+ R G G S + R Sbjct: 308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMAR 469
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.954e-22 Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 143 LFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG---------SKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 LF+ TTLLLW ++F+NAFSYYG VLLT++L C +K A + Y+D+ T+ +E PG++++ ++D++GRK +M L F++ + L L V T+LLF R +G A +Y PE+YPT+ R G G S + R Sbjct: 308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMAR 469
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21 Identity = 59/162 (36.42%), Postives = 87/162 (53.70%), Query Frame = 2 Query: 143 LFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG---------SKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 LF+ TTLLLW ++F+NAFSYYG VLLT++L C +K A + Y+D+ T+ +E PG++++ I+D++GRK +M L FV+ L L + T+LLF R +G A +Y PE+YPT+ R G G S + R Sbjct: 308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMAR 469
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOPL_DANRE (Putative transporter SVOPL OS=Danio rerio GN=svopl PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15 Identity = 51/167 (30.54%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 140 TLFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGS------KVLHADKSK-------DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 TL S RT+LLLW +F +FSYYG+VL +S+L + C + ++ H + ++ Y + I+ E+ + L+ I+++ +GRK SMV++ +L+ F + + + + T+LLF +R + V IY E+YPTS R+ G G ++ R Sbjct: 288 TLISSAFRRTSLLLWYSWFVASFSYYGSVLSSSELLEKNLLCVTDPDLEHQIKHIQEETLCYCIPFNSDDYQTLLISCLGEVALIPLNIILLNIVGRKYSMVILLLLSAFFFMLVNICTTMLGFTILLFLLRSVVSMNFNVVYIYTAEVYPTSVRSIGMGFCTSFSR 454
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOPL_HUMAN (Putative transporter SVOPL OS=Homo sapiens GN=SVOPL PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 8.814e-13 Identity = 49/184 (26.63%), Postives = 83/184 (45.11%), Query Frame = 2 Query: 98 KITDKLKSGFSSFFTLFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSK------VLHADKSKDNSL----------YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 K+ + + F L K +RTTL +WV++ +F+YYG +L +++L D CGSK V D + S Y + I++ E+ L+ + ++ +GR+LS+ + +F L L S+ LF +R IY E+YPT+ R G G + ++ R Sbjct: 257 KLVEPVLEKRGRFADLLDAKYLRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAVVVTGGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCR 440
BLAST of CX288837 vs. ExPASy Swiss-Prot
Match: SVOPL_MOUSE (Putative transporter SVOPL OS=Mus musculus GN=Svopl PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 46/174 (26.44%), Postives = 77/174 (44.25%), Query Frame = 2 Query: 134 FFTLFSRKLIRTTLLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSK------VLHADKSKDNSL------------YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 601 F L K +RTTL +W+++ +F+YYG +L +++L D CGSK V+ L Y + I++ E+ L+ + ++ +GR+LS+ + +F L L S+ LF +R IY E+YPT R G G + ++ R Sbjct: 269 FADLLDSKYLRTTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVETTGDSGEGLSPCYCHIFAPSDYRTMIISTLGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRAIGMGTSGSLCR 442 The following BLAST results are available for this feature:
BLAST of CX288837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288837 ID=CX288837; Name=CX288837; organism=Citrus clementina; type=EST; length=601bpback to top |