CX288844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_DESPS (Argininosuccinate lyase OS=Desulfotalea psychrophila GN=argH PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 6.231e-26 Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KEP FD++ T+ L ++AE ++ FN R +A G++ AT LADYLV K +PFR +H IVG AVA C++K C+L DL+L EM+ +PV + DV+ L E ++ S G TG VTE L Sbjct: 330 KEPVFDAIDTVSASLSITAEMMAHMKFNTARCAEATETGFITATDLADYLVMKDVPFRQAHHIVGSAVAACIAKGCELPDLTLTEMQEFSPVIESDVFAVLTAEGSVNSRVSTGGTGLVRVTEAL 454
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_SYNAS (Argininosuccinate lyase OS=Syntrophus aciditrophicus (strain SB) GN=argH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.780e-23 Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KEP FD+V T+ L++ AE +N+ FN E++++ G+ AT LA+YLV K IPFR +H IVGK V+ C+ + +L LS++E + PV ++D+++ L V N++R S+G T V EQ+ Sbjct: 331 KEPLFDTVDTVKACLQILAEMIRNMKFNREKMRQEAEGGFSTATDLAEYLVMKGIPFREAHGIVGKLVSFCIECKKELAQLSMEEFQRFCPVINEDIHDRLSVSNSVRSRKSYGGTACRQVMEQI 455
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAHJ (Argininosuccinate lyase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=argH PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.100e-22 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FDSV+TI G L + +T N +R+ + + + +AT LADYLV K +PFR +H+IVGK V C+ + L D+ L+ + LN D+DVY+YL EN + + S+GSTG V QL Sbjct: 326 KEGLFDSVRTIKGSLRIFEGMLDTMTVNTDRLNETVHQDFSNATELADYLVAKDVPFRKAHEIVGKIVFECIQQGIYLLDVPLERYKELNSNIDQDVYDYLKPENCLSRRKSYGSTGQDAVRHQL 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_ALKMQ (Argininosuccinate lyase OS=Alkaliphilus metalliredigens (strain QYMF) GN=argH PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.100e-22 Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGST 349 K P FD+V + G LE+ E ++ TF E +KKA G+++AT +ADYLV K +PFR++H+IVGK V CV ++DL+LDE ++ +P F +D+ E + +EN + S GST Sbjct: 324 KIPLFDTVDNVKGCLEIFNEMIKSTTFKKENMKKATKEGFMNATDVADYLVKKGVPFRSAHEIVGKMVLHCVQTSKTIEDLTLDEFQNFSPTFTEDILEVIQIENCVASKISQGST 439
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAR (Argininosuccinate lyase OS=Staphylococcus aureus (strain MRSA252) GN=argH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.436e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V TI G L + Q +T N ER+ + + + +AT LADYLV K IPFRT+H+IVGK V C+ + L D+ L + + D D+Y+YL EN +++ S+GSTG + V +QL Sbjct: 326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLSTYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAS1 (Argininosuccinate lyase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=argH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22 Identity = 50/125 (40.00%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V T+ G L + ++T NVER+++ + + +AT LADYLVNK +PFR++H++VGK V + L D+ L++ +S N + + D+Y+YL EN + + S+GSTG + V +QL Sbjct: 326 KEGLFDAVHTLKGSLRIFDGMIDSMTVNVERLQQTVYNDFSNATELADYLVNKGVPFRSAHEVVGKIVLWSIQHNIYLLDVPLEQYQSANELIEADIYDYLKPENCVSRRISYGSTGQSSVQQQL 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAW (Argininosuccinate lyase OS=Staphylococcus aureus (strain MW2) GN=argH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V TI G L + Q +T N ER+ + + + +AT LADYLV K IPFRT+H+IVGK V C+ + L D+ L + + D D+Y+YL EN +++ S+GSTG + V +QL Sbjct: 326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAT (Argininosuccinate lyase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=argH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V TI G L + Q +T N ER+ + + + +AT LADYLV K IPFRT+H+IVGK V C+ + L D+ L + + D D+Y+YL EN +++ S+GSTG + V +QL Sbjct: 326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAS (Argininosuccinate lyase OS=Staphylococcus aureus (strain MSSA476) GN=argH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V TI G L + Q +T N ER+ + + + +AT LADYLV K IPFRT+H+IVGK V C+ + L D+ L + + D D+Y+YL EN +++ S+GSTG + V +QL Sbjct: 326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450
BLAST of CX288844 vs. ExPASy Swiss-Prot
Match: ARLY_STAAN (Argininosuccinate lyase OS=Staphylococcus aureus (strain N315) GN=argH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 2 KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQIPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 376 KE FD+V TI G L + Q +T N ER+ + + + +AT LADYLV K IPFRT+H+IVGK V C+ + L D+ L + + D D+Y+YL EN +++ S+GSTG + V +QL Sbjct: 326 KEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL 450 The following BLAST results are available for this feature:
BLAST of CX288844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288844 ID=CX288844; Name=CX288844; organism=Citrus clementina; type=EST; length=460bpback to top |