CX288855

Overview
NameCX288855
Unique NameCX288855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5076 contig Ccv1_Contig5076:183..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.893e-22
Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  256 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREM 552
            Y SKK K  LD E  +EF LV +  L+HN A + F LP  T VLGLPIGQHIS +  +  G+++++ YTPT+LDSD VGHFEL+IK Y +G +S HF ++
Sbjct:   25 YQSKKDKPVLDKEKLQEFPLVAKTVLTHNTAIYRFGLPKSTQVLGLPIGQHISVQA-NINGKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQL 123          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = 1
Query:  250 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            +L  S KP+  L+P  F+ F L ++ ++SHNVA + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +
Sbjct:   29 FLGGSGKPRKVLNPTEFQNFVLKEKNEISHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKY 126          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 1
Query:  262 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            S KP+  L+P  F+ F L ++  +SHNVA + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +
Sbjct:   37 SSKPRKVLNPSEFQNFVLKEKTDISHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKY 130          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_CRYNE (NADH-cytochrome b5 reductase 1 OS=Cryptococcus neoformans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1
Query:  250 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            +++  +K +  LDP  ++ FKLV +  LSHN A + F LP  +  LGLPIGQHIS    +  G++V++ YTPTTLD D GHF+LV+K Y +G +S +
Sbjct:   30 FIFFQEKDRKVLDPVEWRSFKLVDKDHLSHNTALYRFALPRASDSLGLPIGQHISV-AAEINGKQVVRSYTPTTLDDDKGHFDLVVKTYEKGNISRY 125          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  268 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            KP+  L+P  F+EF L +++ +SHNV  + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +
Sbjct:   52 KPRKVLNPTEFQEFVLKEKIDVSHNVCIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKY 143          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-19
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 1
Query:  262 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            S KP+  L+P  F+ F L  +  +SHNV  + F LP PT +LGLPIGQHIS       Q +E+++ YTP + D D G+F+L++K YPQG +S H
Sbjct:   49 SNKPRKVLNPTEFQNFVLKDKTIVSHNVCIYRFALPRPTDILGLPIGQHISLAATIPGQSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKH 142          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-19
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 1
Query:  262 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            SK  KV L+P  F+EF L ++  +SHNV+ + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S H
Sbjct:   51 SKARKV-LNPTEFQEFVLKEKTDISHNVSIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKH 143          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.029e-19
Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = 1
Query:  262 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            S KP+  L+P  F+ F L ++  +SHNV  + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +
Sbjct:   54 SSKPRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKY 147          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 5.262e-19
Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 1
Query:  253 LYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            +YSS   KV L P  F+EF+L ++  LSHN A + F+LP  T +LGLPIGQHIS     + Q +EV++ YTP + D D GHF+L+IK YP G +S +
Sbjct:   24 VYSSGSKKV-LKPNEFQEFELEEKTVLSHNTAIYRFKLPRKTDILGLPIGQHISLGATIEGQPKEVVRSYTPISSDEDKGHFDLLIKSYPTGNISKY 119          
BLAST of CX288855 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.262e-19
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  250 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHH 540
            +L  SKK    L P+ F++F L++++++SHN A + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D  +GHF+L+IK Y  G +S H
Sbjct:   37 FLQQSKKHTPVLKPDEFQKFPLIEKIRVSHNSAIYRFGLPKSTDRLGLPIGQHISI-GATIDGKEVVRSYTPISTDDQLGHFDLLIKTYENGNISRH 132          
The following BLAST results are available for this feature:
BLAST of CX288855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
NCB5R_KLULA3.893e-2253.00NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
NCB5R_ASPOR6.216e-2045.92NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_ASPTN8.118e-2046.81NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_CRYNE1.385e-1946.39NADH-cytochrome b5 reductase 1 OS=Cryptococcus neo... [more]
NCB5R_ASPFU1.385e-1946.74NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
NCB5R_COCIM2.362e-1946.81NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_ASPCL2.362e-1948.94NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_EMENI4.029e-1945.74NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]
NCB5R_PHANO5.262e-1949.48NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]
NCB5R_CANAL5.262e-1946.39NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]

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Properties
Property NameValue
Genbank descriptionC02006B09SK IF1 Citrus clementina cDNA clone C02006B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288855 ID=CX288855; Name=CX288855; organism=Citrus clementina; type=EST; length=553bp
GAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTCCCACCCATTT
ACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATTTATTCTTTAT
ATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAGCTT
TTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCAGCT
TCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTTGGTGCTGCTT
ACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAATTTC
AAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGCAAA
GTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAATTG
GACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTTATT
AAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGAATT
GGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTGAGA
TGC
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