CX288871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2) HSP 1 Score: 281.182 bits (718), Expect = 2.230e-75 Identity = 140/182 (76.92%), Postives = 148/182 (81.32%), Query Frame = 2 Query: 2 EDVKRALEEQYGGEEELXXXXXXXXXXXXXXX-KYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVS 544 ED+KRALEEQYGGEEEL KYSNAYMLVYIRESDKDKIICNVDEKDIAEHLR+RL RRYKAQAHLYTIIKVARDEDL EQIG+DIYFDLVDHDKVRSFR+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL PQEE Q VGQ+RE S Sbjct: 479 EDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 3.220e-74 Identity = 134/181 (74.03%), Postives = 147/181 (81.22%), Query Frame = 2 Query: 2 EDVKRALEEQYGGEEELXXXXXXXXXXXXXXXKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVS 544 EDVKRALEEQYGGEEEL KYSNAYMLVYIRESDKDKIICNVDEKDIAEHLR+RL R+YKAQAHL+T IKVARD+D+ EQIG++IYFDLVDH+KVRSFR+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL P EE QTVGQ+RE S Sbjct: 478 EDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREAS 658
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP5_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 5 OS=Schizosaccharomyces pombe GN=ubp5 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.423e-13 Identity = 45/165 (27.27%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 8 VKRALEEQYGGEEELXXXXXXXXXXXXXXXKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDI--YFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPL 496 ++ LEE YGG+ + ++ +AYML+Y+R+ D+++ V +I EHL+ L R+ + ++HLYT +++ E +E DI + + + + FR++K+ F F +A++ G P + RFW KR N T R P+ Sbjct: 490 LREVLEENYGGDYIMHPPFRSPVKLK----RFMSAYMLLYLRKDKLDELMNPVSADEIPEHLKEALNPSIQLAELRRKERLESHLYTKVQLITPEFYSEHHEFDIADFGNAYKEETIPQFRIKKEAKFSEFIPIVAEKLGYPQECMRFWYVVKRHNCTVRVESPV 650
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP7_RAT (Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.140e-13 Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 2 Query: 11 KRALEEQYGGEEELXXXXXXXXXXXXXXXKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRP 484 + A+E YGG ++ +NAYMLVYIRES +++ V + DI + L RL R+ + +AHLY +++ ++ G D+Y D +KVR F+V K +S F + +++ G P R W R N T RP Sbjct: 492 EEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRP 636
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP7_MOUSE (Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.140e-13 Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 2 Query: 11 KRALEEQYGGEEELXXXXXXXXXXXXXXXKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRP 484 + A+E YGG ++ +NAYMLVYIRES +++ V + DI + L RL R+ + +AHLY +++ ++ G D+Y D +KVR F+V K +S F + +++ G P R W R N T RP Sbjct: 492 EEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRP 636
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP7_HUMAN (Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 47/160 (29.38%), Postives = 74/160 (46.25%), Query Frame = 2 Query: 11 KRALEEQYGGEEELXXXXXXXXXXXXXXXKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRP 484 + A+E YGG ++ +NAYMLVYIRES +++ V + DI + L RL R+ + +AHLY +++ ++ G D+Y D +KV+ F+V K +S F + +++ G P R W R N T RP Sbjct: 491 EEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRP 635
BLAST of CX288871 vs. ExPASy Swiss-Prot
Match: UBP7_CHICK (Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.054e-12 Identity = 46/160 (28.75%), Postives = 74/160 (46.25%), Query Frame = 2 Query: 11 KRALEEQYGGEEELXXXXXXXXXXXXXXXKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRP 484 + A+E YGG ++ +NAYMLVYIRES +++ V + DI + L RL R+ + +AHLY +++ ++ G D+Y D +KV+ F+V K ++ F + +++ G P R W R N T RP Sbjct: 491 EEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQPVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVKYTVFKVLKNSTLTEFVQNLSQTMGFPQDQIRLWPMQARSNGTKRP 635 The following BLAST results are available for this feature:
BLAST of CX288871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288871 ID=CX288871; Name=CX288871; organism=Citrus clementina; type=EST; length=545bpback to top |