CX288922

Overview
NameCX288922
Unique NameCX288922
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15470 contig Ccv1_Contig15470:187..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288922 vs. ExPASy Swiss-Prot
Match: PPA29_ARATH (Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.746e-43
Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 1
Query:    4 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 324
            S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LCYGGGFGYHAYGKAGWERRARVVV  L K  K  WG VKSIKTWKRLDD+HL+ +D  VLW+ +++
Sbjct:  278 SAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLCYGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLWNNSAN 384          
BLAST of CX288922 vs. ExPASy Swiss-Prot
Match: PPA14_ARATH (Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.395e-33
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    7 SASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 324
            S  +NSGFFT +V  G+VK VF+GHDHVNDFC  L GI LCY GG GYH YG+ GW RR RVV A LEKT    WG V +IKTWKRLDD++ + +D  +LW+K ++
Sbjct:  281 SPPINSGFFTKLVERGEVKGVFSGHDHVNDFCAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKNHSLIDTQLLWTKNTT 386          
BLAST of CX288922 vs. ExPASy Swiss-Prot
Match: PPA28_ARATH (Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.113e-31
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 1
Query:    1 ISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGMR 333
            ++ + V SG   T V+ G+VKA F GHDHVNDFCG L G+  CYGGGFGYHAYG+  W RRARV+ A L K  +  W  +K IKTWKRLDDE+L+ +D  VLW  + S ++
Sbjct:  288 VACSIVQSGVLQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLGK-GRDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDSFLK 397          
The following BLAST results are available for this feature:
BLAST of CX288922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPA29_ARATH2.746e-4371.96Probable inactive purple acid phosphatase 29 OS=Ar... [more]
PPA14_ARATH4.395e-3359.43Probable inactive purple acid phosphatase 14 OS=Ar... [more]
PPA28_ARATH4.113e-3154.95Probable inactive purple acid phosphatase 28 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC02007A01SK IF1 Citrus clementina cDNA clone C02007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288922 ID=CX288922; Name=CX288922; organism=Citrus clementina; type=EST; length=596bp
ATAAGCTCTGCTTCTGTGAACTCAGGCTTCTTCACAACCATGGTTGCAGC
AGGGGATGTGAAGGCTGTTTTCACAGGCCATGATCATGTCAATGATTTCT
GTGGCCGGCTTACTGGTATACAACTCTGTTATGGTGGGGGTTTTGGATAC
CATGCCTATGGAAAGGCTGGATGGGAGAGGAGGGCAAGGGTGGTTGTAGC
CAGTTTGGAGAAAACAGAGAAGAGAGGCTGGGGAGATGTCAAGTCAATCA
AAACATGGAAGCGCCTTGATGATGAACACCTAACTGGTGTTGATGGTCAT
GTCCTCTGGAGTAAGACCTCTTCAGGTATGCGCAGAAGGAAACACACTAA
TGGTGCTTGAGTGATTCAAGCGGGACCTGTGTTTCTTATGTGGACTTGGA
ACCGGCGACCTGGCTGTAGGAAATATGTTATTTTGAGTATGGTTCAGTGG
CAATACTGTCAATGGCATTGTTGTTTAGGAGTTGAATGTGTTATACACAT
CTTCGAAACGACAGTGATGTAATATACCTTGGAAGAAAAAGCAGAGAACA
AGGTTAGGATGAGAAAATTCTGTTTTGCTCCCGGTAGGATGAGAAA
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