CX288927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.319e-27 Identity = 65/112 (58.04%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AMLKLGMKPVTGVSRVTIKRTKN+LFFISKPDVFKSP+SETYVIFGEAKIED FRMP++G+ + + RDIDLVMTQA Sbjct: 79 AMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDIDLVMTQA 190
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25 Identity = 62/112 (55.36%), Postives = 70/112 (62.50%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AMLKLGMKPVT VSRVTIKR+KN+LF ISKPDVFKSPNSETYVIFGEAKI+D F+MPD+ S++ D +DIDLVMTQA Sbjct: 74 AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLVMTQA 185
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.878e-23 Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AMLKLGMKP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEAKIED F+ PD+ +V++K + P+DI+LVMTQA Sbjct: 69 AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFKAPDLSNVISKGE----SSSAAVVQDDEEVDEEGVEPKDIELVMTQA 176
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.428e-22 Identity = 57/112 (50.89%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 A+LKLGMKPV+ VSRVTIKR KN+LF ISKPDV+KSPN+ETYVIFGEAK++D F+MPD+ S++ RDIDLVMTQA Sbjct: 71 AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEARDIDLVMTQA 182
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.156e-22 Identity = 57/113 (50.44%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPD-XXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AMLKLGMKP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEAKIED F+ P++ +V+++ + P+DI+LVMTQA Sbjct: 65 AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQA 177
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.259e-22 Identity = 57/112 (50.89%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AMLKLGMKPV+GVSRVTIK++KNILF IS PDVFKSP S+TY+ FGEAKIED F+ P++ V KP+ P+DI+LVMTQA Sbjct: 72 AMLKLGMKPVSGVSRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQAAEQFKAPNLSHVTMKPE-----SSTAAQEDEDEVDDTGVEPKDIELVMTQA 178
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACAD_MOUSE (NAC-alpha domain-containing protein 1 OS=Mus musculus GN=Nacad PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMA---KPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AM KLG++ + GV+R+TI+++KNILF I+KPDVFKSP S+TYV+FGEAKIED F++P S + P PRDI+LVM QA Sbjct: 1363 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEEDEEVEEAGLEPRDIELVMAQA 1477
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA_ORENI (Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.998e-16 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++P G ++ +DI+LVM+QA Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVP--GETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQA 188
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA_XENTR (Nascent polypeptide-associated complex subunit alpha OS=Xenopus tropicalis GN=naca PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15 Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA Sbjct: 78 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQA 187
BLAST of CX288927 vs. ExPASy Swiss-Prot
Match: NACA_XENLA (Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15 Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 234 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQA 569 AM KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED F++ G ++ +DI+LVM+QA Sbjct: 77 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV--QGETVSNIQENTQTPTVQEESEEEEVDEAGVEVKDIELVMSQA 186 The following BLAST results are available for this feature:
BLAST of CX288927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288927 ID=CX288927; Name=CX288927; organism=Citrus clementina; type=EST; length=571bpback to top |