CX288958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_ARATH (Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 3.957e-55 Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 1 Query: 163 NQMDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 +QMDPD+V+KAFVEHYY+TFD NR GLA LYQE +MLTFEGQKIQG Q+IVAKLTSLP QQC+H I+TVDCQPSGPA GMLVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDI Sbjct: 2 SQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDI 120
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_ORYSJ (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.365e-38 Identity = 76/117 (64.96%), Postives = 89/117 (76.07%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 MD D+VAKAFVEHYY TFD NR L +LYQ+G+MLTFEGQ+ G+ I KL SLP QC H I TVDCQPSGP GGMLVFVSG+L+ ++H LKFSQMF L+P G+FYV ND+ Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQCHHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDM 116
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_EMENI (Nuclear transport factor 2 OS=Emericella nidulans GN=ntf2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.157e-28 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 172 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 D S+A+ FV YY TFD NR GLA LY++ +MLTFE IQG I+ KLTSLP Q+ QH ++T+D QPSG GG+LV V+G L + E++ + ++Q F LMP GS++VLND+ Sbjct: 3 DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQHQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDV 118
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_ASHGO (Nuclear transport factor 2 OS=Ashbya gossypii GN=NTF2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.385e-28 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 MD ++A+ F E YY FD +R+ L NLY++ +MLTFE ++QG+++IV KL SLP Q+ QH ITT+D QP+ P G +LV ++G+L + EQ+A +FSQ+FHLMP S+YV NDI Sbjct: 3 MDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMP-EGNSYYVFNDI 118
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_KLULA (Nuclear transport factor 2 OS=Kluyveromyces lactis GN=NTF2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.491e-27 Identity = 60/117 (51.28%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 +D S+A+ F E YY FD++RT L NLY+E +MLTFE ++QG+++IV KL SLP Q+ H ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHLMP S+YV NDI Sbjct: 3 VDFSSLAQQFTEFYYNQFDSDRTQLGNLYREQSMLTFETTQLQGAKDIVEKLVSLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMP-EGSSYYVYNDI 118
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_CANGA (Nuclear transport factor 2 OS=Candida glabrata GN=NTF2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.732e-26 Identity = 57/117 (48.72%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 MD +++A+ F E YY FD++R+ L NLY++ +MLTFE ++QG+++IV KL SLP Q+ H ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHL+P S+YV NDI Sbjct: 3 MDFNALAQQFTEFYYNQFDSDRSQLGNLYRDESMLTFETSQLQGAKSIVEKLVSLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIP-DGNSYYVFNDI 118
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_YEAST (Nuclear transport factor 2 OS=Saccharomyces cerevisiae GN=NTF2 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26 Identity = 56/117 (47.86%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 +D +++A+ F + YY FD +R+ L NLY+ +MLTFE ++QG+++IV KL SLP Q+ QH ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHL+P S+YV NDI Sbjct: 3 LDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIP-DGNSYYVFNDI 118
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_SCHPO (Nuclear transport factor 2 OS=Schizosaccharomyces pombe GN=ntf2 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26 Identity = 56/116 (48.28%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 172 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 D +++A F + YY TFD++R+ L++LY+E +ML+FEG ++QG++ IV KL SLP Q+ QH I+T+D QP+G G ++V V+G L L EQ A ++SQ+FHL+ G++YVLND+ Sbjct: 3 DYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDL 117
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_DEBHA (Nuclear transport factor 2 OS=Debaryomyces hansenii GN=NTF2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26 Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 +D ++VA F YY FD++RT L NLY+E +MLTFE ++QG+++IV KL SLP Q+ H I+T+D QP P G +LV V+G L + EQ+A ++SQ+FHL+P S+YV NDI Sbjct: 3 VDFNTVASEFCNFYYQQFDSDRTQLGNLYREQSMLTFETSQLQGAKDIVEKLVSLPFQKVAHRISTLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIP-DGNSYYVFNDI 118
BLAST of CX288958 vs. ExPASy Swiss-Prot
Match: NTF2_CANAL (Nuclear transport factor 2 OS=Candida albicans GN=NTF2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.279e-25 Identity = 56/117 (47.86%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 169 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGTMLTFEGQKIQGSQNIVAKLTSLPLQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 519 +D ++VA F YY FD++R+ L NLY+ +MLTFE ++QG+++IV KL SLP Q+ H I+T+D QP+ G +LV V+G L + EQ+A ++SQ+FHL+P GS+YV NDI Sbjct: 3 VDFNAVATEFCNFYYNQFDSDRSQLGNLYRNESMLTFETSQLQGARDIVEKLASLPFQKVAHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIP-DNGSYYVFNDI 118 The following BLAST results are available for this feature:
BLAST of CX288958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288958 ID=CX288958; Name=CX288958; organism=Citrus clementina; type=EST; length=521bpback to top |