CX288995

Overview
NameCX288995
Unique NameCX288995
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length422
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288995 vs. ExPASy Swiss-Prot
Match: GSTZ_EUPES (Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.142e-22
Identity = 46/62 (74.19%), Postives = 57/62 (91.94%), Query Frame = -2
Query:  236 KYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 421
            ++ATGDEV+LADL L PQ++AA+ RFN+DMTQFPLLLRLHEAYS+LP FQNA+P+KQPD+ S
Sbjct:  160 RFATGDEVYLADLFLEPQIHAAITRFNVDMTQFPLLLRLHEAYSQLPEFQNAMPDKQPDSTS 221          
BLAST of CX288995 vs. ExPASy Swiss-Prot
Match: GSTZ_WHEAT (Glutathione S-transferase OS=Triticum aestivum GN=GSTZ1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.297e-20
Identity = 41/63 (65.08%), Postives = 54/63 (85.71%), Query Frame = -2
Query:  233 KYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 421
            KY  GDEV L D+CLAPQ++AA+NRF +DMT++P+L RLH+AY K+PAFQ A+P+ QPDAPS+
Sbjct:  150 KYCVGDEVHLGDVCLAPQIHAAINRFQIDMTKYPILSRLHDAYMKIPAFQAALPQNQPDAPSA 212          
BLAST of CX288995 vs. ExPASy Swiss-Prot
Match: GSTZ2_ARATH (Probable glutathione S-transferase zeta-class 2 OS=Arabidopsis thaliana GN=At2g02380 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.001e-20
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = -2
Query:  233 KYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 421
            KYATGDEV+LADL LAPQ++AA NRF+++M  FP L R +E+Y++LPAFQNAVPEKQPD PS+
Sbjct:  160 KYATGDEVYLADLFLAPQIHAAFNRFHINMEPFPTLARFYESYNELPAFQNAVPEKQPDTPST 222          
BLAST of CX288995 vs. ExPASy Swiss-Prot
Match: GSTZ1_ARATH (Glutathione S-transferase zeta-class 1 OS=Arabidopsis thaliana GN=GST18 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.333e-19
Identity = 40/63 (63.49%), Postives = 55/63 (87.30%), Query Frame = -2
Query:  233 KYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 421
            K+ATGDE++LADL LAPQ++ A+NRF ++M  +P L + +E+Y++LPAFQNA+PEKQPDAPSS
Sbjct:  157 KHATGDEIYLADLFLAPQIHGAINRFQINMEPYPTLAKCYESYNELPAFQNALPEKQPDAPSS 219          
The following BLAST results are available for this feature:
BLAST of CX288995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GSTZ_EUPES7.142e-2274.19Glutathione S-transferase zeta class OS=Euphorbia ... [more]
GSTZ_WHEAT2.297e-2065.08Glutathione S-transferase OS=Triticum aestivum GN=... [more]
GSTZ2_ARATH3.001e-2069.84Probable glutathione S-transferase zeta-class 2 OS... [more]
GSTZ1_ARATH4.333e-1963.49Glutathione S-transferase zeta-class 1 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionC02007G10SK IF1 Citrus clementina cDNA clone C02007G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288995 ID=CX288995; Name=CX288995; organism=Citrus clementina; type=EST; length=422bp
CTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTAAAGGAGCTCAAAAAATTCTTATTATTTATTGATTCAAGGGTTCCTAT
CATAGAGTAACCCCATACATATTCAAAACAGAACAAACCACTCCTACTCC
CTGACTCCTTGAAAGCTCATGTAAAAAATCCCAATGTTCACACTTAATGC
TGCTTACTGAGCGTAAACAAAGGTTGATTTCATGATGAAGGGGCATCCGG
TTGTTTTTCTGGAACAGCATTTTGAAATGCCGGTAGCTTGCTGTATGCCT
CATGCAACCTCAGCAAAAGAGGGAATTGGGTCATGTCAAGGTTGAACCTG
TTGACCGCTGCATAAAGCTGGGGGGCCAAACACAAATCTGCCAGGAAAAC
TTCATCTCCAGTTGCATATTTC
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