CX288997

Overview
NameCX288997
Unique NameCX288997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.516e-61
Identity = 109/188 (57.98%), Postives = 141/188 (75.00%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINKIANGFV 565
            VAGS+DI NTY+  R R  +YD+ +YT L+   AS F  +LYG GVRR+ VF APP+GC+PS RTLGGG  RDCA++YNEAA++FN+KLS +LDSL    P  + + I+IY+PL  +IQNP  YGFEV NKGCCGTG +E ++ CN+ + + C +VS ++FWD YHPTE+TYK+LVS LINK  N FV
Sbjct:  178 VAGSDDIANTYYTLRARP-EYDVDSYTTLMSDSASEFVTKLYGYGVRRVAVFGAPPIGCVPSQRTLGGGILRDCADNYNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTGAIEVAVLCNKITSSVCPDVSTHVFWDSYHPTEKTYKVLVSLLINKFVNQFV 364          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.742e-52
Identity = 91/187 (48.66%), Postives = 130/187 (69.52%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINKIANGF 562
            + GSNDI N +F     +L Y ++++T L+   A +F + LYG G RR+ VF APP+GC+PS RT+ GG TRDC   +N+AA++FNTKLSA +D L+    D  ++ IDIY+PLL LI NP +YGF+V NKGCCGTG +E +  CN ++ + C   S Y+FWD +HPTE+ Y+I+V+ L+++  N F
Sbjct:  188 ICGSNDIANDFFTLPPVRLHYTVASFTALMADNARSFAQTLYGYGARRILVFGAPPIGCVPSQRTVAGGPTRDCVARFNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGCCGTGLIEVTALCNNYTASVCPIRSDYVFWDSFHPTEKAYRIIVAKLLDRYLNRF 374          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.510e-48
Identity = 83/182 (45.60%), Postives = 126/182 (69.23%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            + GSNDI NTYF     + QYD++++T L+   A +F ++L+  G RR+ VF APP+GC+PS RTL GG TR+C   +N+A +++N KL+A L SL+    D  ++ +DIY+ LL +I +P +YGF+VV+KGCCGTG +E ++ CN F+ + C N   Y+FWD +HPTE+TY+I+ +    +
Sbjct:  196 ICGSNDITNTYFGLPSVQQQYDVASFTTLMADNARSFAQKLHEYGARRIQVFGAPPVGCVPSQRTLAGGPTRNCVVRFNDATKLYNVKLAANLGSLSRTLGDKTIIYVDIYDSLLDIILDPRQYGFKVVDKGCCGTGLIEVALLCNNFAADVCPNRDEYVFWDSFHPTEKTYRIMATKYFER 377          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.246e-47
Identity = 90/180 (50.00%), Postives = 123/180 (68.33%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            VA SNDI +TY A   R ++Y+ ++Y D +   AS F   LYGLG RR+GVFSA P+GC+P++RTL G   R C+   NE A+ FN K+S  L++L  + PD+R++LID+ + L  +I+NP  YGFEV N+GCCGTG +E    CN+ +  TC N S YIFWD YHPTE+ Y+I+V  L+
Sbjct:  185 VASSNDIAHTYTA---RSIKYNKTSYADYLADSASKFVSALYGLGARRIGVFSAVPVGCVPAARTLRGKLKRRCSEKLNEVARNFNAKISPTLEALGKELPDSRVVLIDVCDTLNDMIENPKNYGFEVSNRGCCGTGLVEVLFLCNKINPFTCKNSSSYIFWDSYHPTEKAYQIIVDKLL 361          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 9.869e-45
Identity = 81/180 (45.00%), Postives = 114/180 (63.33%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            VAGS+D+ NTY+   + +  YDI  YT  +   A++F  +LY  G +++G     P+GC+P  RT  GG  R CA++ N AAQ+FN+KLS  L+ L     +  L+ IDIY+    +IQNP KYGF+ +++GCCGTG LE    CN+++   C NVS ++FWD YHPTER YKIL    +
Sbjct:  213 VAGSDDLANTYYGEHLEEFLYDIDTYTSFMASSAASFAMQLYESGAKKIGFIGVSPIGCIPIQRTTRGGLKRKCADELNFAAQLFNSKLSTSLNELAKTMKNTTLVYIDIYSSFNDMIQNPKKYGFDEIDRGCCGTGLLELGPLCNKYTSLLCKNVSSFMFWDSYHPTERAYKILSQKFV 392          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 6.397e-44
Identity = 85/182 (46.70%), Postives = 124/182 (68.13%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            V+ SND+  TY+   VR ++YD ++Y + +V LAS F KEL  LG + +G+FS  P+GCLP+ RTL GG  R C    N  A  FN+KLS+ LD+L  + P +RL+ ID+Y+ LL +I+NP  YGF+V +KGCCGTG +E    CN+F+  TC++ S ++F+D YHP+E+ Y+I+   L+ K
Sbjct:  167 VSSSNDLAETYW---VRSVEYDRNSYAEYLVELASEFIKELSELGAKNIGLFSGVPVGCLPAQRTLFGGFERKCYEKLNNMALHFNSKLSSSLDTLKKELP-SRLIFIDVYDTLLDIIKNPTNYGFKVADKGCCGTGKIELMELCNKFTPFTCSDASTHVFFDSYHPSEKAYQIITHKLLAK 344          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.021e-41
Identity = 85/183 (46.45%), Postives = 120/183 (65.57%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGK-TRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            V+ SND+ +TY A   R   YD ++Y + +   A  F +EL+ LG R++GVFSA P+GC+P  RT+ GG  TR C    N  A+ FN +LS  LDSL+ +  D  +L I++Y+ L  +IQ+P KYGFEV ++GCCG G L  S  CN  +  TC+N S YIFWD YHP+ER Y+++V +L++K
Sbjct:  165 VSSSNDLAHTYLAQTHR---YDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKEL-DGVILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAISYLCNSLNPFTCSNSSAYIFWDSYHPSERAYQVIVDNLLDK 343          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.021e-41
Identity = 85/183 (46.45%), Postives = 120/183 (65.57%), Query Frame = 2
Query:    2 VAGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGK-TRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            V+ SND+ +TY A   R   YD ++Y + +   A  F +EL+ LG R++GVFSA P+GC+P  RT+ GG  TR C    N  A+ FN +LS  LDSL+ +  D  +L I++Y+ L  +IQ+P KYGFEV ++GCCG G L  S  CN  +  TC+N S YIFWD YHP+ER Y+++V +L++K
Sbjct:  165 VSSSNDLAHTYLAQTHR---YDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKEL-DGVILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAISYLCNSLNPFTCSNSSAYIFWDSYHPSERAYQVIVDNLLDK 343          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.620e-41
Identity = 79/182 (43.41%), Postives = 113/182 (62.09%), Query Frame = 2
Query:    5 AGSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRDCANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLE-ASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLINK 547
            AGS+D    Y+ + +    Y + AY   ++   STF K++Y +G R++GV S PP GCLP++RTL G   + C +  N  AQ FN KL+A    L  Q+ D ++++ DIY+PL  L+QNP K GF    KGCCGTGT+E  S+ CN  S  TC+N + Y+FWD  HP+E   +IL ++LI +
Sbjct:  166 AGSSDFVQNYYVNPLLYKVYTVDAYGSFLIDNFSTFIKQVYAVGARKIGVTSLPPTGCLPAARTLFGFHEKGCVSRLNTDAQNFNKKLNAAASKLQKQYSDLKIVVFDIYSPLYDLVQNPSKSGFTEATKGCCGTGTVETTSLLCNPKSFGTCSNATQYVFWDSVHPSEAANEILATALIGQ 347          
BLAST of CX288997 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.604e-40
Identity = 75/179 (41.90%), Postives = 114/179 (63.69%), Query Frame = 2
Query:    8 GSNDIDNTYFASRVRKLQYDISAYTDLIVGLASTFFKELYGLGVRRMGVFSAPPLGCLPSSRTLGGGKTRD-CANDYNEAAQMFNTKLSAELDSLNIQFPDARLLLIDIYNPLLYLIQNPIKYGFEVVNKGCCGTGTLEASIFCNQFSLNTCTNVSGYIFWDGYHPTERTYKILVSSLI 541
            GS+D   +Y+ + +    +    Y+D ++   STF + LYGLG RR+GV + PPLGCLP++ TL GG   + C    N+ A  FNTKL+    +L    P  +L++ DIYNPLL ++ NP++YGF    + CCGTGT+E S  CN  S+ TC+N + Y+FWDG+HP+E   +++ ++L+
Sbjct:  167 GSSDFLQSYYINPILNRIFTPDQYSDHLLRSYSTFVQNLYGLGARRIGVTTLPPLGCLPAAITLFGGVGNNMCVERLNQDAVSFNTKLNNTSINLTNNLPGLKLVVFDIYNPLLNMVINPVEYGFFESRRACCGTGTMETSFLCNALSVGTCSNATNYVFWDGFHPSEAANRVIANNLL 345          
The following BLAST results are available for this feature:
BLAST of CX288997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
EXL3_ARATH1.516e-6157.98GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
EXL1_ARATH3.742e-5248.66GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
EXL2_ARATH2.510e-4845.60GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]
GDL90_ARATH1.246e-4750.00GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
GDL4_ARATH9.869e-4545.00GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL52_ARATH6.397e-4446.70GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]
GDL26_ARATH1.021e-4146.45GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH1.021e-4146.45GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
APG2_ARATH6.620e-4143.41GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL72_ARATH5.604e-4041.90GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02007G12SK IF1 Citrus clementina cDNA clone C02007G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288997 ID=CX288997; Name=CX288997; organism=Citrus clementina; type=EST; length=640bp
GGTAGCAGGCAGCAATGACATAGACAATACCTATTTTGCAAGCCGCGTTA
GGAAATTGCAGTATGATATCTCTGCTTATACTGATCTTATAGTTGGACTT
GCTTCAACATTCTTCAAGGAATTATATGGACTTGGGGTGCGAAGGATGGG
AGTGTTCAGTGCACCGCCGCTTGGGTGCTTGCCGTCATCGAGAACATTGG
GTGGAGGCAAAACCAGAGATTGTGCAAACGATTACAACGAAGCAGCGCAA
ATGTTCAACACTAAATTGTCCGCAGAATTGGACTCTCTGAATATCCAATT
CCCCGATGCTAGGCTTCTTTTAATTGATATCTACAACCCTCTGCTTTATC
TCATACAAAACCCTATTAAATACGGATTTGAAGTTGTGAATAAGGGGTGC
TGCGGTACCGGAACTTTAGAGGCATCAATATTTTGTAATCAGTTCAGCCT
CAACACATGTACAAATGTGTCTGGTTATATTTTTTGGGACGGTTACCATC
CCACAGAGAGAACATATAAAATCCTCGTCTCTAGTCTCATAAACAAGATT
GCTAATGGTTTCGTTTGCGCTGGTTCTCCTTGTTGAATCTATTTGAATGA
AATATAACGGGTCAAAAAAAAAAAAAAAAAAACTCGAGGG
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