CX289002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: YEIA_ECOLI (Uncharacterized protein yeiA OS=Escherichia coli (strain K12) GN=yeiA PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 3.833e-28 Identity = 70/150 (46.67%), Postives = 94/150 (62.67%), Query Frame = 3 Query: 6 NFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANT 455 NFSCP M MG+ VGQ L+E++C + +T+P+ AKMTPNI D+ E A A G++G++AINT+ S+ IDL P V G S+ GYS KAV PIA L + M++ +D+ +SGIGG+ET DAAEF+LLGA T Sbjct: 134 NFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIA----LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAAT 278
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_MOUSE (Dihydropyrimidine dehydrogenase [NADP+] OS=Mus musculus GN=Dpyd PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.843e-22 Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ VP +AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGRRTTYGGVSGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_HUMAN (Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.843e-22 Identity = 58/151 (38.41%), Postives = 83/151 (54.97%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ +P +AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGVSGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_DICDI (Dihydropyrimidine dehydrogenase [NADP+] OS=Dictyostelium discoideum GN=pyd1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.843e-22 Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGI-DLKTLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM E+ MG A GQD L+ C W+ A +P +AK+TPN+T+I E A+ A G++GV+AINT+ +MG+ P E +T GG S A PIAL V SI K + DY + GG ++ +F+ GA+ Sbjct: 665 LNLSCPHGMGEKGMGLACGQDTELVFHICQWVRAATRLPFFAKLTPNVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIGDEKRTTYGGVSGNATRPIALRAVSSIRKSL------PDYPIMATGGADSADATIQFLHCGAS 809
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_BOVIN (Dihydropyrimidine dehydrogenase [NADP+] OS=Bos taurus GN=DPYD PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.843e-22 Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ +P +AK+TPN+TDI AR A G+ GV+A NT+ +MG+ P P V E +T GG S A+ PIAL V +IA+ + ++ + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADG-TPWPAVGREKRTTYGGVSGTAIRPIALRAVTTIARAL------PEFPILATGGIDSAESGLQFLHGGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_PIG (Dihydropyrimidine dehydrogenase [NADP+] OS=Sus scrofa GN=DPYD PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.105e-22 Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ +P +AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPG------FPILATGGIDSAESGLQFLHSGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_PONAB (Dihydropyrimidine dehydrogenase [NADP+] OS=Pongo abelii GN=DPYD PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 7.002e-22 Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ +P +AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG S A+ PIAL V S A+ + + + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGVSGTAIRPIALRAVTSTARALPG------FPILATGGIDSAESGLQFLHSGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_RAT (Dihydropyrimidine dehydrogenase [NADP+] OS=Rattus norvegicus GN=Dpyd PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.145e-22 Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ VP +AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG S + PIAL V +IA+ + + + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRQSVRVPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-SPWPSVGSGKRTTYGGVSGTTIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_DANRE (Dihydropyrimidine dehydrogenase [NADP+] OS=Danio rerio GN=dpyd PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.321e-20 Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM ER MG A GQD L+ C W+ ++P +AK+TPN+T+I + A A G++GV+A NT+ +M + P P + +T GG S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ Sbjct: 667 LNLSCPHGMGERGMGLACGQDPELVRNICRWVRKATSIPFFAKLTPNVTNIVDIATAAYEGGADGVTATNTVSGLMALKADA-TPWPGIGRGARTTYGGVSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLHAGAS 811
BLAST of CX289002 vs. ExPASy Swiss-Prot
Match: DPYD_CAEEL (Dihydropyrimidine dehydrogenase [NADP+] OS=Caenorhabditis elegans GN=dpyd-1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.321e-20 Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 3 VNFSCPHGMPERKMGAAVGQDCTLLEQFCGWINAKATVPVWAKMTPNITDITEPARVALISGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKAVHPIAL*KVLSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 452 +N SCPHGM E+ MG A GQ ++++ C W+ A +P + KMTPNITD+ E AR A G+ GV+A NT+ S+M + P +T GG S A+ PIA+ V SIA + + + GG+E+ F++ GA+ Sbjct: 681 LNLSCPHGMGEKGMGLACGQSPEIVKEICRWVRACVKIPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGSTKRTTYGGMSGSAIRPIAMKAVSSIANELDG------FPIMATGGIESAETGLGFLMAGAS 825 The following BLAST results are available for this feature:
BLAST of CX289002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289002 ID=CX289002; Name=CX289002; organism=Citrus clementina; type=EST; length=455bpback to top |