CX289006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2) HSP 1 Score: 377.096 bits (967), Expect = 4.254e-104 Identity = 187/214 (87.38%), Postives = 205/214 (95.79%), Query Frame = 1 Query: 1 VPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 VPQLAKKLNQILVQHIK +LP LKSRIS+ALV+ AKEH SYGE+TES+AGQGALLLN LSKY EA+SS++EGK+EEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGP+SALFVPDVPFEVL+RRQI+RLLDPSLQCARFI++ELIKISH C++NELQRFPVLRKRMDEVIG+FLREGLEPSE MIG II+MEMDYIN Sbjct: 310 VPQLAKKLNQILVQHIKVLLPDLKSRISNALVATAKEHQSYGELTESRAGQGALLLNFLSKYCEAYSSLLEGKSEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPRSALFVPDVPFEVLVRRQISRLLDPSLQCARFIFEELIKISHRCMMNELQRFPVLRKRMDEVIGDFLREGLEPSEAMIGDIIDMEMDYIN 523
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2) HSP 1 Score: 352.443 bits (903), Expect = 1.122e-96 Identity = 173/214 (80.84%), Postives = 199/214 (92.99%), Query Frame = 1 Query: 1 VPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 VPQLAKKLNQ+LVQHIKA+LP LKSRI++AL + AKE+ SYG+ITES+ GQGALLL+ ++KY EA+SS +EGK++EMSTSELSGGARI YIFQS+FVKSLEEVDPCEDLT DDIRTAIQNATGP+SALFVPDVPFEVL+RRQI+RLLDPSLQCARFI+DEL+KISH C++ ELQRFPVL+KRMDEVIGNFLREGLEPS+ MI +IEMEMDYIN Sbjct: 295 VPQLAKKLNQVLVQHIKALLPSLKSRINNALFATAKEYESYGDITESRGGQGALLLSFITKYCEAYSSTLEGKSKEMSTSELSGGARILYIFQSVFVKSLEEVDPCEDLTADDIRTAIQNATGPRSALFVPDVPFEVLVRRQISRLLDPSLQCARFIFDELVKISHQCMMKELQRFPVLQKRMDEVIGNFLREGLEPSQAMIRDLIEMEMDYIN 508
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 2.372e-46 Identity = 91/212 (42.92%), Postives = 145/212 (68.40%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE-ITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 L+K LN++L+ HI+ LP LK ++S L V E ++YG+ + ++K QGALLL I++ +S F ++GK ++S +EL GGARI YIF I+ + +DP E ++ +DIRT ++NATGP++ALF+P++ FE+L+++Q+ RL +PS QC ++YDEL +I EL RF L+ R+ EV+ N L++ P++TMI H+I++E +IN Sbjct: 279 LSKTLNKLLMFHIRDTLPDLKVKVSKMLSDVQGELSTYGDPLYDTKNSQGALLLQIITIFSSNFKDAIDGKLTDLSNNELYGGARISYIFNEIYSHCVNNIDPLEGISLNDIRTTMRNATGPRAALFIPEISFELLVKKQVVRLEEPSAQCVEYVYDELQRIVSQLEAKELSRFINLKARVIEVVNNLLQKHKVPTKTMIEHLIKIETAFIN 490
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.220e-44 Identity = 85/212 (40.09%), Postives = 143/212 (67.45%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEI-TESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LAK LNQ L+ HI+ LP +K+++++ + +E A YG + + + +L+L +++K+S F S ++G + +++T EL GGARI+YI+ ++F SL+ +DP +L+ D+RTAI+N+TGP+ LFVP++ F++L++ QI LL+PS +C +Y+EL+KI H C EL R+P L+ + EVI LRE L+P+ + + +I++ YIN Sbjct: 316 LAKLLNQTLLSHIRDKLPDIKTKLNTLISQTEQELARYGGVGATTNESRASLVLQLMNKFSTNFISSIDGTSSDINTKELCGGARIYYIYNNVFGNSLKSIDPTSNLSVLDVRTAIRNSTGPRPTLFVPELAFDLLVKPQIKLLLEPSQRCVELVYEELMKICHKCGSAELARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYIN 527
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.298e-41 Identity = 82/214 (38.32%), Postives = 140/214 (65.42%), Query Frame = 1 Query: 4 PQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHCLVNEL-QRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 P LA+KLN IL+ HI+ LP +K RI++AL E S G+ +++LN+++ + + ++V+G++EE+S +ELSGGARI ++F IF ++ +DP +++ D DIRT + N++GP +LF+ FEV++++QI RL DPSL+C IYDEL++I + L + +R+P+L+ +V+ F R+ ++P+ T++ ++ ME YIN Sbjct: 292 PFLARKLNMILMHHIRNTLPEIKVRINAALAKYQAELHSLGDTPVGD--NSSIVLNLITDFCNEYRTVVDGRSEELSATELSGGARIAFVFHEIFSNGIQAIDPFDEVKDSDIRTILYNSSGPSPSLFMGTAAFEVIVKQQIKRLEDPSLKCVSLIYDELVRILNQLLQRPIFKRYPLLKDEFYKVVIGFFRKCMQPTNTLVMDMVAMEGSYIN 503
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.001e-41 Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHC---LVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LA+ LN++L+ HI+ LP LK+RI+ +SYGE E + A LL +++K++ + + +EG + + T+EL GGARI YIF F ++LE VDP LT D+ TAI+NATGP+ ALFVP+V FE+L++RQ+ RL +PSL+C +++E+ +I HC EL RFP L + EV+ + LR+ L + M+ +++ +E+ YIN Sbjct: 284 LARTLNRLLMHHIRDCLPELKTRINVLSAQYQSLLSSYGEPVEDMS---ATLLQLITKFATEYCNTIEGTAKYIETAELCGGARICYIFHETFGRTLESVDPLGGLTTIDVLTAIRNATGPRPALFVPEVSFELLVKRQVKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTSLLRKRLPVTNEMVHNLVAIELAYIN 494
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.686e-41 Identity = 91/214 (42.52%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHC---LVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LA+ LN++L+ HI+ LP LK+RI+ SYGE + K+ A LL +++K++ + + +EG + + TSEL GGARI YIF F ++LE VDP L DI TAI+NATGP+ ALFVP+V FE+L++RQI RL +PSL+C +++E+ +I HC EL RFP L + EV+ LR+ L + M+ +++ +E+ YIN Sbjct: 298 LARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 508
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 6.686e-41 Identity = 91/214 (42.52%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHC---LVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LA+ LN++L+ HI+ LP LK+RI+ SYGE + K+ A LL +++K++ + + +EG + + TSEL GGARI YIF F ++LE VDP L DI TAI+NATGP+ ALFVP+V FE+L++RQI RL +PSL+C +++E+ +I HC EL RFP L + EV+ LR+ L + M+ +++ +E+ YIN Sbjct: 291 LARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 501
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 6.686e-41 Identity = 91/214 (42.52%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHC---LVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LA+ LN++L+ HI+ LP LK+RI+ SYGE + K+ A LL +++K++ + + +EG + + TSEL GGARI YIF F ++LE VDP L DI TAI+NATGP+ ALFVP+V FE+L++RQI RL +PSL+C +++E+ +I HC EL RFP L + EV+ LR+ L + M+ +++ +E+ YIN Sbjct: 285 LARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 495
BLAST of CX289006 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.686e-41 Identity = 91/214 (42.52%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 10 LAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPKSALFVPDVPFEVLIRRQIARLLDPSLQCARFIYDELIKISHHC---LVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYIN 642 LA+ LN++L+ HI+ LP LK+RI+ SYGE + K+ A LL +++K++ + + +EG + + TSEL GGARI YIF F ++LE VDP L DI TAI+NATGP+ ALFVP+V FE+L++RQI RL +PSL+C +++E+ +I HC EL RFP L + EV+ LR+ L + M+ +++ +E+ YIN Sbjct: 298 LARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 508 The following BLAST results are available for this feature:
BLAST of CX289006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289006 ID=CX289006; Name=CX289006; organism=Citrus clementina; type=EST; length=643bpback to top |