CX289018

Overview
NameCX289018
Unique NameCX289018
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:600..980. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.146e-49
Identity = 94/126 (74.60%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGGYD+PAESKILVNAWWLANNPA WK+             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSK+DTAEKGGQFSLHILKHSTIVAKPRSF
Sbjct:  380 LHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKPRSF 505
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.008e-49
Identity = 94/126 (74.60%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGGYD+PAESKILVNAWWLANNPA WKK             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  381 LHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF 506
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.008e-49
Identity = 93/126 (73.81%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGGYD+PAESKILVNAWWLANNPA WKK             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHST+VAKPRSF
Sbjct:  380 LHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTVVAKPRSF 505
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.008e-49
Identity = 94/126 (74.60%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGG+D+PAESKILVNAWWLANNP QWKK             +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  380 LHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKPRSF 505
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.153e-49
Identity = 93/126 (73.81%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGG+D+PAESKILVNAWWLANNPA WK              +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  380 LHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.153e-49
Identity = 93/126 (73.81%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGG+D+PAESKILVNAWWLANNPA WK              +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  380 LHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 9.153e-49
Identity = 94/126 (74.60%), Postives = 96/126 (76.19%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKL G+D+PAESKILVNAWWLANNPAQWKK             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIV KPRSF
Sbjct:  379 LHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVCKPRSF 504
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.478e-48
Identity = 92/124 (74.19%), Postives = 94/124 (75.81%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPR 374
            LHDAKLGGYD+PAESKILVNAWWLANNP QWKK             SKVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQ K+DT EKGGQFSLHILKHSTIVAKPR
Sbjct:  380 LHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVAKPR 503
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 4.543e-48
Identity = 92/126 (73.02%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGG+D+PAESKILVNAWWLANNPA WKK             + VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPR+F
Sbjct:  380 LHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRAF 505
[Close]
BLAST of CX289018 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 5.022e-47
Identity = 91/126 (72.22%), Postives = 96/126 (76.19%), Query Frame = 3 
Query:    3 LHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 380
            LHDAKLGGYD+PAESKILVNAW+LANNP  WKK             SKVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPG+SKIDT+EKGGQFSLHILKHSTIV KPR+F
Sbjct:  380 LHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGGQFSLHILKHSTIVLKPRTF 505
The following BLAST results are available for this feature:
BLAST of CX289018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TCMO_GLYEC3.146e-4974.60Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_SOYBN7.008e-4974.60Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU7.008e-4973.81Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_HELTU7.008e-4974.60Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_POPTM9.153e-4973.81Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI9.153e-4973.81Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CICAR9.153e-4974.60Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_ZINEL3.478e-4874.19Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PEA4.543e-4873.02Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_CATRO5.022e-4772.22Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]

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Properties
Property NameValue
Genbank descriptionC02008B05SK IF1 Citrus clementina cDNA clone C02008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289018 ID=CX289018; Name=CX289018; organism=Citrus clementina; type=EST; length=381bp
ACCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAA
ATCCTAGTGAACGCGTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAA
ACCTGAAGAATTCAGGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTG
AGGCTAATGGAAATGACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGA
AGCTGCCCTGGAATTATCCTTGCTTTGCCAATTCTTGGTATCACTATTGG
GCGTTTGGTACAGAACTTTGAGCTCTTGCCTCCTCCAGGTCAATCTAAGA
TTGACACTGCAGAGAAAGGTGGGCAGTTCAGTTTGCACATTTTGAAGCAC
TCGACCATTGTTGCCAAGCCTAGATCATTCT
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