CX289024

Overview
NameCX289024
Unique NameCX289024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length384
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_ARATH (Autophagy-related protein 7 OS=Arabidopsis thaliana GN=ATG7 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.272e-50
Identity = 95/126 (75.40%), Postives = 109/126 (86.51%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVL 379
            LA+SA DLNLKLMRWR LPSLNL++LSS KCLLLGAGTLGCQVAR LM WG+R IT +D G+VAMSNP+RQSLY  +DCL  G+FKA+AAVKSL++IFPA+   GVVMAIPMPGHP+  QEEDSVL
Sbjct:  330 LAVSAVDLNLKLMRWRALPSLNLNVLSSVKCLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYNFEDCLGRGEFKAVAAVKSLKQIFPAMETSGVVMAIPMPGHPISSQEEDSVL 455          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_CRYNE (Autophagy-related protein 7 OS=Cryptococcus neoformans GN=ATG7 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.549e-39
Identity = 75/122 (61.48%), Postives = 93/122 (76.23%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEE 367
            LA  A DLNLKL++WR LP+L+LD +S  +CLLLGAGTLGC VAR+LM WGVR ITL+D+  V+ SNP+RQ L+T  DCLNGG  KA  A K L+ IFP V A+GVV+ IPMPGHP+   ++
Sbjct:  312 LAAQAVDLNLKLIKWRLLPALDLDKISGTRCLLLGAGTLGCYVARILMGWGVRNITLVDSSTVSYSNPVRQPLFTFSDCLNGGLPKAPTAAKKLQEIFPGVNAQGVVLGIPMPGHPISSSDD 433          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_CHICK (Autophagy-related protein 7 OS=Gallus gallus GN=ATG7 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.459e-38
Identity = 76/121 (62.81%), Postives = 94/121 (77.69%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQE 364
            LA S+ DLNLKLM WR +P+L+L+ + S KCLLLGAGTLGC VAR LM WGVRKIT +DN R++ SNP+RQ LY  +DCL+GG  KA+AA + L++IFP V +EG  M+IPMPGHPV   E
Sbjct:  334 LAESSVDLNLKLMCWRLVPTLDLEKIVSAKCLLLGAGTLGCSVARTLMGWGVRKITFVDNARISYSNPVRQPLYEFEDCLSGGKPKALAAAERLQKIFPGVNSEGYNMSIPMPGHPVNFSE 454          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_RAT (Autophagy-related protein 7 OS=Rattus norvegicus GN=Atg7 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.694e-37
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA S+ DLNLKLM WR +P+L+LD + S KCLLLGAGTLGC VAR LM WGVR +T +DN +++ SNP+RQ LY  +DCL GG  KA+AA + L++IFP V A G  M+IPMPGHPV
Sbjct:  324 LAESSVDLNLKLMCWRLVPTLDLDKVVSVKCLLLGAGTLGCNVARTLMGWGVRHVTFVDNAKISYSNPVRQPLYEFEDCLGGGKPKALAAAERLQKIFPGVNASGFNMSIPMPGHPV 440          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_MOUSE (Autophagy-related protein 7 OS=Mus musculus GN=Atg7 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.694e-37
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA S+ DLNLKLM WR +P+L+LD + S KCLLLGAGTLGC VAR LM WGVR +T +DN +++ SNP+RQ LY  +DCL GG  KA+AA + L++IFP V A G  M+IPMPGHPV
Sbjct:  324 LAESSVDLNLKLMCWRLVPTLDLDKVVSVKCLLLGAGTLGCNVARTLMGWGVRHVTFVDNAKISYSNPVRQPLYEFEDCLGGGKPKALAAAERLQKIFPGVNARGFNMSIPMPGHPV 440          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_HUMAN (Autophagy-related protein 7 OS=Homo sapiens GN=ATG7 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.130e-37
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA S+ DLNLKLM WR +P+L+LD + S KCLLLGAGTLGC VAR LM WGVR IT +DN +++ SNP+RQ LY  +DCL GG  KA+AA   L++IFP V A G  M+IPMPGHPV
Sbjct:  328 LAESSVDLNLKLMCWRLVPTLDLDKVVSVKCLLLGAGTLGCNVARTLMGWGVRHITFVDNAKISYSNPVRQPLYEFEDCLGGGKPKALAAADRLQKIFPGVNARGFNMSIPMPGHPV 444          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_AJECN (Autophagy-related protein 7 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=ATG7 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.972e-35
Identity = 69/117 (58.97%), Postives = 88/117 (75.21%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  + DLNLKLM+WR  P+LNL+ + + KCLLLGAGTLG  VAR L+ WGVRKIT +DNG V+ SNP+RQ L+  +DCL GG  KA+ A  +LE I+P V A G V+++PMPGHP+
Sbjct:  351 LADQSVDLNLKLMKWRISPNLNLENIKNTKCLLLGAGTLGSYVARNLLGWGVRKITFVDNGTVSFSNPVRQPLFGFNDCLGGGAKKALRAAAALEEIYPGVDASGYVLSVPMPGHPI 467          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_PICAN (Autophagy-related protein 7 OS=Pichia angusta GN=ATG7 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.278e-34
Identity = 67/117 (57.26%), Postives = 89/117 (76.07%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  A DLNLKLM+WR +P+L+LD + + KCLLLG+GTLG  V R L+AWGVRKIT +DNG+V+ SNP+RQ L+   DCL+GG  KA  A ++++RIFP V A+G  + +PM GHP+
Sbjct:  281 LADQAIDLNLKLMKWRIVPTLDLDRIKATKCLLLGSGTLGSYVGRALLAWGVRKITFVDNGKVSFSNPVRQPLFNFIDCLDGGSPKAETAAENMKRIFPLVDAQGFTLEVPMAGHPI 397          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_DICDI (Autophagy-related protein 7 OS=Dictyostelium discoideum GN=atg7 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.848e-34
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSV 376
            LA  + DLNLKLMRWR +PSL L+ + +  CLLLG+GTLGC VAR LM+WGVR IT +D+ +V+ SNP+RQSL+T  DC      K++AA  +L++IFPA+ A   V +IPMPGH VP  E  S+
Sbjct:  334 LAEQSVDLNLKLMRWRVMPSLELEKIKTTSCLLLGSGTLGCNVARSLMSWGVRNITFVDSSKVSYSNPVRQSLFTFADCSPKAKEKSIAAADALKKIFPAINANAHVFSIPMPGHSVPQSEYQSI 458          
BLAST of CX289024 vs. ExPASy Swiss-Prot
Match: ATG7_SCLS1 (Autophagy-related protein 7 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg7 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.413e-33
Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 2
Query:    2 LAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPV 352
            LA  A DLNLKLM+WR  P L+LD + + KCLLLGAGTLG  V+R+LM WGVRKIT +DN  V+ SNP+RQ L+   DC++GG  KA  A ++L+ I+P V + G VM++PM GHP+
Sbjct:  320 LADQAVDLNLKLMKWRIAPELDLDAIKNTKCLLLGAGTLGTYVSRLLMGWGVRKITFIDNASVSFSNPVRQPLFDFKDCIDGGAKKAYRAAEALQEIYPGVDSTGHVMSVPMLGHPI 436          
The following BLAST results are available for this feature:
BLAST of CX289024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
ATG7_ARATH1.272e-5075.40Autophagy-related protein 7 OS=Arabidopsis thalian... [more]
ATG7_CRYNE6.549e-3961.48Autophagy-related protein 7 OS=Cryptococcus neofor... [more]
ATG7_CHICK1.459e-3862.81Autophagy-related protein 7 OS=Gallus gallus GN=AT... [more]
ATG7_RAT4.694e-3762.39Autophagy-related protein 7 OS=Rattus norvegicus G... [more]
ATG7_MOUSE4.694e-3762.39Autophagy-related protein 7 OS=Mus musculus GN=Atg... [more]
ATG7_HUMAN6.130e-3763.25Autophagy-related protein 7 OS=Homo sapiens GN=ATG... [more]
ATG7_AJECN1.972e-3558.97Autophagy-related protein 7 OS=Ajellomyces capsula... [more]
ATG7_PICAN1.278e-3457.26Autophagy-related protein 7 OS=Pichia angusta GN=A... [more]
ATG7_DICDI2.848e-3455.20Autophagy-related protein 7 OS=Dictyostelium disco... [more]
ATG7_SCLS11.413e-3356.41Autophagy-related protein 7 OS=Sclerotinia sclerot... [more]

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Properties
Property NameValue
Genbank descriptionC02008B11SK IF1 Citrus clementina cDNA clone C02008B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289024 ID=CX289024; Name=CX289024; organism=Citrus clementina; type=EST; length=384bp
GTTGGCCATATCTGCTGCAGATTTGAATTTAAAATTAATGAGATGGCGTC
AGTTGCCATCTCTGAACCTAGACATCTTATCTTCTCGGAAGTGTCTTCTC
CTAGGAGCAGGTACTCTTGGATGCCAGGTTGCTCGCATGCTTATGGCTTG
GGGTGTCCGGAAAATTACATTACTTGACAATGGCAGAGTGGCAATGTCTA
ATCCATTGAGGCAGTCGCTTTATACATTGGATGACTGCCTCAATGGTGGT
GATTTTAAAGCAATGGCAGCAGTGAAAAGCCTTGAGAGGATATTTCCAGC
CGTGGCGGCAGAAGGTGTTGTAATGGCTATACCAATGCCTGGGCATCCAG
TGCCTTGTCAAGAAGAAGATAGTGTTCTTGATGA
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