CX289037

Overview
NameCX289037
Unique NameCX289037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length384
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:407..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.097e-53
Identity = 96/111 (86.49%), Postives = 103/111 (92.79%), Query Frame = 2
Query:    5 IPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVEK 337
            +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD DI ALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DPAFRPLVEK
Sbjct:  113 VPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEK 223          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.359e-52
Identity = 95/112 (84.82%), Postives = 102/112 (91.07%), Query Frame = 2
Query:    2 DIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVEK 337
            ++PFHPGR DK EPP EGRLPDA QG+DHLRQVF AQMGLSD DI ALSGGHTLGRCHKERSGFEG WT NPLIFDNSYFTEL++GEK+GLLQLPSDKAL+ DPAFRPLVEK
Sbjct:  113 EVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEK 224          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.775e-52
Identity = 95/111 (85.59%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    5 IPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVEK 337
            +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD DI ALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DPAF PLVEK
Sbjct:  113 VPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEK 223          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 2.170e-50
Identity = 92/112 (82.14%), Postives = 98/112 (87.50%), Query Frame = 2
Query:    2 DIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVEK 337
            ++PFHPGR+DK EPP EGRLPDA +G+DHLR VFG  MGLSD DI ALSGGHT+G  HKERSGFEGPWT NPLIFDNSYFTELLTGEKDGLLQLPSDKALL D  FRPLVEK
Sbjct:  112 EVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEK 223          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 3.134e-49
Identity = 91/112 (81.25%), Postives = 97/112 (86.61%), Query Frame = 2
Query:    2 DIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVEK 337
            DIPFHPGR+DK +PP EGRLPDA +G DHLR VF  QMGLSD DI ALSG HTLGRCHK+RSGFEG WT NPLIFDNSYF ELL+GEK+GLLQL SDKALLDDP FRPLVEK
Sbjct:  112 DIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEK 223          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.901e-46
Identity = 88/112 (78.57%), Postives = 96/112 (85.71%), Query Frame = 2
Query:    2 DIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVEK 337
            +IPFHPGR DK EPP EGRLP A +G DHLR VFG +MGL+D DI ALSGGHTLGRCHKERSGFEG WT NPLIFDNSYF E+L+GEK+GLLQLP+DKALLDDP F P VEK
Sbjct:  113 EIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEK 223          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.906e-38
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 2
Query:    2 DIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVE 334
            DI F PGR D    P+EGRLPDAKQG  HLR VF  +MGLSD DI ALSGGHTLGR H ERSGF+GPWT+ PL FDNSYF ELL GE +GLL+LP+DK LL+DP FR LVE
Sbjct:  110 DIVFVPGRKDSNVCPKEGRLPDAKQGFQHLRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVE 219          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.973e-36
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 2
Query:    5 IPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVE 334
            + F PGR D +  P+EGRLPDAK+G  HLR +F  +MGLSD DI ALSGGHTLGR H ERSGFEG WT+ PL FDNSYF ELL GE +GLL+LP+DKALL+DP+FR  V+
Sbjct:  111 VEFIPGRRDSSVCPREGRLPDAKKGALHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVD 219          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.848e-34
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 2
Query:    5 IPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVE 334
            I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSD DI ALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE
Sbjct:  112 IDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVE 220          
BLAST of CX289037 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.848e-34
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 2
Query:    5 IPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDTDIGALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPAFRPLVE 334
            I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSD DI ALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE
Sbjct:  112 IDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVE 220          
The following BLAST results are available for this feature:
BLAST of CX289037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
APX1_ORYSJ2.097e-5386.49L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ1.359e-5284.82L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI1.775e-5285.59L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_PEA2.170e-5082.14L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH3.134e-4981.25L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH1.901e-4678.57L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH1.906e-3871.17L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ3.973e-3667.27Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ2.848e-3463.64Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI2.848e-3463.64Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC02008D03SK IF1 Citrus clementina cDNA clone C02008D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289037 ID=CX289037; Name=CX289037; organism=Citrus clementina; type=EST; length=384bp
CGATATCCCCTTCCACCCGGGAAGAGATGACAAGGCTGAGCCACCTCAAG
AAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGGCAAGTC
TTTGGTGCTCAGATGGGCCTCAGCGACACGGATATTGGTGCTCTCTCTGG
TGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGAC
CATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACGGAGCTC
TTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGACAAGGCCCT
TCTGGATGACCCTGCTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGATG
AGGACGCTTTCTTCGCTGATTATGCTGAGGCTCA
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