CX289046

Overview
NameCX289046
Unique NameCX289046
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15546 contig Ccv1_Contig15546:355..875. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.152e-71
Identity = 116/134 (86.57%), Postives = 119/134 (88.81%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE 493
            KGDYYRYLAEFK G+EKKEAA  SMK           DLPPTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK NGTAK+GGGEDAE
Sbjct:  128 KGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGGGEDAE 261          

HSP 2 Score: 55.4546 bits (132), Expect = 1.152e-71
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            RQKVE ELS+ICND+M VIDEHLIPSA+AG+  +
Sbjct:   89 RQKVELELSNICNDVMRVIDEHLIPSAAAGESTV 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.175e-69
Identity = 113/134 (84.33%), Postives = 118/134 (88.06%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE 493
            KGDYYRYLAEFK G+EKKEA   SMK           +LPPTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGED+QKANGTAK GGG+DAE
Sbjct:  128 KGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKANGTAKFGGGDDAE 261          

HSP 2 Score: 51.2174 bits (121), Expect = 5.175e-69
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            R KVE+ELS+IC D+M VIDEHLIPSA+AG+  +
Sbjct:   89 RHKVETELSNICIDVMRVIDEHLIPSAAAGESTV 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 5.612e-65
Identity = 105/134 (78.36%), Postives = 113/134 (84.33%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE 493
            KGDYYRYLAEFK G++KKE A  S+K           +L PTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD+LNE+SYKDSTLIMQLLRDNLTLWTSD+PED EDAQK + T K GGGEDAE
Sbjct:  128 KGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQKGDATNKAGGGEDAE 261          

HSP 2 Score: 53.9138 bits (128), Expect = 5.612e-65
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:    6 QKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            QKVESEL++ICNDIM VID+HLIPS SAG+  +
Sbjct:   90 QKVESELTNICNDIMVVIDQHLIPSCSAGESTV 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.927e-62
Identity = 99/134 (73.88%), Postives = 109/134 (81.34%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE 493
            KGDYYRYLAEFK GD+KKE +  S+K           +LP THPIRLGLALNFSVFYYEIMNSPERAC LAKQ FDEAISELD+LNE++YKD TLI+QLLRDNLTLWTSDIPEDGE+A K +   KVG GEDAE
Sbjct:  128 KGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPKGDAANKVGAGEDAE 261          

HSP 2 Score: 57.7658 bits (138), Expect = 1.927e-62
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            RQKVESEL+DICN+IMTVIDEHLIPS +AG+  +
Sbjct:   89 RQKVESELTDICNNIMTVIDEHLIPSCTAGESTV 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 7.261e-62
Identity = 107/136 (78.68%), Postives = 115/136 (84.56%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED-GEDAQKANGTAKVG-GGEDAE 493
            KGDYYRYLAEFK G+E+KEAA  S+K            LPPTHPIRLGLALNFSVFYYEIMN+PERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI E+ G+DA K NG+AK G GG+DAE
Sbjct:  128 KGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDAHKTNGSAKPGAGGDDAE 263          

HSP 2 Score: 48.521 bits (114), Expect = 7.261e-62
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3
Query:    6 QKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            +KVE ELS+IC DIM+V+DEHLIPSAS G+  +
Sbjct:   90 EKVELELSNICIDIMSVLDEHLIPSASEGESTV 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.286e-60
Identity = 103/133 (77.44%), Postives = 113/133 (84.96%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDA 490
            KGDYYRYLAEFK GDE+KEAA +SMK           +L  THPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDIPEDGE+ QK + +A+  GG+DA
Sbjct:  128 KGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEE-QKVD-SARADGGDDA 258          

HSP 2 Score: 51.6026 bits (122), Expect = 2.286e-60
Identity = 24/31 (77.42%), Postives = 30/31 (96.77%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R KVESELS+IC+DIMTVIDE+LIPS+S+G+
Sbjct:   89 RLKVESELSNICSDIMTVIDEYLIPSSSSGE 119          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.208e-55
Identity = 92/115 (80.00%), Postives = 98/115 (85.22%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG 436
            KGDYYRYLAEFK   E+KEAA  S+K           +LP THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+PEDG
Sbjct:  131 KGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDG 245          

HSP 2 Score: 49.2914 bits (116), Expect = 1.208e-55
Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            RQKVE EL++IC DI+T+ID+HLIP A++G+  +
Sbjct:   92 RQKVEDELANICQDILTIIDQHLIPHATSGEATV 125          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 7.737e-55
Identity = 90/119 (75.63%), Postives = 101/119 (84.87%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQ 448
            KGDYYRYLAEFK GD++KEA+  S+K           DL PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELD+L+EESYKDSTLIMQLLRDNLTLWTSD+ E GE ++
Sbjct:  126 KGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLEEGGEHSK 244          

HSP 2 Score: 48.1358 bits (113), Expect = 7.737e-55
Identity = 19/34 (55.88%), Postives = 29/34 (85.29%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGKEII 104
            RQ+VE EL+ IC+DI++VIDEHL+PS++ G+  +
Sbjct:   87 RQRVEDELTKICSDILSVIDEHLVPSSTTGESTV 120          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 5.847e-52
Identity = 93/131 (70.99%), Postives = 104/131 (79.39%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGE 484
            KGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDI ED  +  K     + G G+
Sbjct:  132 KGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEIKEAPKGESGDGQ 262          

HSP 2 Score: 38.5058 bits (88), Expect = 5.847e-52
Identity = 15/29 (51.72%), Postives = 24/29 (82.76%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASA 89
            R K+E+ELS IC+ I+ ++D HL+PS++A
Sbjct:   93 RGKIETELSKICDGILKLLDSHLVPSSTA 121          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.740e-51
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+KEAA +++            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K
Sbjct:  131 KGDYHRYLAEFKTGAERKEAAESTLTGYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250          

HSP 2 Score: 41.5874 bits (96), Expect = 3.740e-51
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+ESELS+IC+ I+ ++D  LIPSAS+G
Sbjct:   92 RSKIESELSNICDGILKLLDTRLIPSASSG 121          
The following BLAST results are available for this feature:
BLAST of CX289046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433D_SOYBN1.152e-7186.5714-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
1433B_VICFA5.175e-6984.3314-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
14339_SOLLC5.612e-6578.3614-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
14338_SOLLC1.927e-6273.8814-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14339_ARATH7.261e-6278.6814-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
1433C_SOYBN2.286e-6077.4414-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14312_ARATH1.208e-5580.0014-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
14337_SOLLC7.737e-5575.6314-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
14335_ORYSJ5.847e-5270.9914-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433_PEA3.740e-5173.3314-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02008E03SK IF1 Citrus clementina cDNA clone C02008E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289046 ID=CX289046; Name=CX289046; organism=Citrus clementina; type=EST; length=521bp
ATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATATCATG
ACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGGAGAT
TATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAGAGGC
TGCTGCTAATTCAATGAAAGCGTATGAGACAGCTACCACTGCTGCAGAGG
CTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAATTTC
TCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCCATCT
TGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTCAACG
AGGAGTCCTACAAAGACAGCACCTTAATTATGCAGCTTCTTAGGGACAAC
CTTACCTTATGGACTTCTGACATTCCAGAAGATGGAGAAGATGCCCAGAA
GGCTAATGGCACTGCCAAAGTTGGTGGGGGAGAAGATGCAGAGGTAGGTT
TTCTCTTTTAAATGCTATTAT
back to top