CX289049

Overview
NameCX289049
Unique NameCX289049
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3496 contig Ccv1_Contig3496:392..979. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.242e-45
Identity = 85/184 (46.20%), Postives = 129/184 (70.11%), Query Frame = 2
Query:   14 TTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLK 565
            TT+V SSA  A+E+L+ QD +F  R +PDA+ A+ H    + +L V T WR LR+I +S+ FS+  L+A QHLR KK+++L+AY ++   +   +HIG+AAF T+LNL+SNTIFS DL DP   + +EF++    +M ++ K NL D FPVL+ +D QGI+R M  +F K+L +FD+LI++R++
Sbjct:   71 TTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIFSKDLTDPYEDSGKEFREVITNIMVDSAKTNLVDVFPVLKKIDPQGIKRGMARHFSKVLGIFDQLIEERMR 254          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 5.187e-31
Identity = 74/192 (38.54%), Postives = 110/192 (57.29%), Query Frame = 2
Query:    8 RGTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD-PTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER 580
            R T VV SS   AKE L+  D     RT  DA+ A  HH+  + W+P +  WR L+K    +  S + LDA Q LR +K+++L++ V E    G AI + +A+F T+ N+ISN +FS+DLA   ++ ++ EF  T   + + AG PN+ D+F  +  LDLQG R++  +   K+  VF   ID RL +R  R
Sbjct:   79 RLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARASFVTSFNIISNALFSVDLATYDSNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLDLQGTRKKAVLCIEKLFRVFQEFIDARLAKRFSR 270          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.490e-30
Identity = 68/186 (36.56%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   17 TVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATL-WRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQR 571
            +VV +S   A+E+L+  D     R   D+I   GH E  + WLP ++  WR LRK+  +  FS ++ +A + LR KK+Q+L++++ E+     A+ I +A++ T LN+ISN +FS+DL    SK + EF+ T  G ME AGKP+ +++FP +  LDLQG R+ M     ++  VF   +D ++ ++
Sbjct:   82 SVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNILFSVDLGSYDSKKSNEFQDTVIGAMEAAGKPDAANYFPFMGFLDLQGNRKAMRGLTERLFRVFRGFMDAKIAEK 267          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28
Identity = 67/190 (35.26%), Postives = 113/190 (59.47%), Query Frame = 2
Query:   17 TVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATL-WRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERD 583
            TVV +S   A+E+L+  D    +RT  ++I +  H +  + WLP ++  WR LRK+  +  FS ++++A + LR  K+++L++++ E+     A+ I +A F T LN+ISN +FS+DL +  S  +  F+ T  G+ME  G P+ ++FFP L  LDLQG R+ +     ++  VF   ID +L ++  RD
Sbjct:   82 TVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDLGNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFLDLQGNRKTLKACSERLFKVFRGFIDAKLAEKSLRD 271          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26
Identity = 63/192 (32.81%), Postives = 106/192 (55.21%), Query Frame = 2
Query:   17 TVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA----GTAIHIGQAAFDTTLNLISNTIFSIDLA-DPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE 577
            T+V  +A  A E+ +N D SF +R I D   AH +++  M   P    WR  R+IC    F  ++++   ++R++ +  +L   +E   +    G  I + +  F  + N++ N IFS DL  DP SK   EF     G+ME AG PN+SD FP L+  D+QG+R++M    GK  ++  + I++R+++R++
Sbjct:   37 TMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSKDLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKKFIEERIEERKK 228          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.554e-25
Identity = 58/190 (30.53%), Postives = 105/190 (55.26%), Query Frame = 2
Query:   17 TVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA---GTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE 577
            T+V  +A  ++E+ +N D SF NR IPD   AH +++  +   P    WR  R+IC    F  +++   + +RRK + ++L ++++   +   G+ I + +  F  + N++ N I S DLAD  S+ A EF      + E +G  N+SD FP L+  DLQ +R++M    GK +++    + +R ++R++
Sbjct:   79 TMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNMLGNLILSKDLADLESEEASEFFIAMKRINEWSGIANVSDIFPFLKKFDLQSLRKKMARDMGKAVEIMSMFLKEREEERKK 268          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.334e-23
Identity = 58/191 (30.37%), Postives = 111/191 (58.12%), Query Frame = 2
Query:   17 TVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATL-WRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTA-REFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERD 583
            TVV +S   A+E+L+  D     R+  +A+ +  H +  + WLP ++  WR LR++  +   S ++++A + LR  K+++L++++ E+     ++ I + AF TTLN+ISN +FS+DL    +K +    + T   +M+ AG P+ +++FP L  LDLQG  +   V   +++ VF   ID ++ ++  ++
Sbjct:   82 TVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNILFSVDLGSYNAKASINGVQDTVISVMDAAGTPDAANYFPFLRFLDLQGNVKTFKVCTERLVRVFRGFIDAKIAEKSSQN 272          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.748e-22
Identity = 55/185 (29.73%), Postives = 98/185 (52.97%), Query Frame = 2
Query:   14 TTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFS---IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQR 559
            T VV S+++ A EIL+  D     R +  +    GH E  + W      W+NLRK+C +  F+ + +++  H+R KK ++++ Y+ +  + G  + I +  F T +N+  N IFS    +L DP S ++ EFK+  W M+E     N +D+FP+L   DL G R+ +      +  ++  ++ +R
Sbjct:   71 TVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGSS-EFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEVAECLKGIYAIWGAMLQER 252          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21
Identity = 54/185 (29.19%), Postives = 97/185 (52.43%), Query Frame = 2
Query:   14 TTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFS---IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQR 559
            T VV S+++ A EIL+  D     R +  +    GH E  + W      W+NLRK+C +  F+ + +++  H+R KK ++++ Y+ +  + G  + I +  F T +N+  N IFS    +L  P S ++ EFK+  W M+E     N +D+FP+L   DL G R+ +      +  ++  ++ +R
Sbjct:   72 TVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNSGSS-EFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEVAECLKGIYAIWGAMLQER 253          
BLAST of CX289049 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.161e-14
Identity = 53/189 (28.04%), Postives = 89/189 (47.09%), Query Frame = 2
Query:   20 VVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE 577
            VV S+A  AKE L+  + +F NR   T+      +G  +F   + P    W+ ++K+C S       LD    +R+ + +  +  V +   +G A+  G      + N++S  I S            E ++      E +GK N+SDF   L+  DLQG  +R+     K+ D FD ++D+ +KQR+E
Sbjct:   76 VVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDF--LFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRLE----KIRDCFDTVLDRIIKQREE 258          
The following BLAST results are available for this feature:
BLAST of CX289049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
C76B1_HELTU8.242e-4546.207-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C3_ARATH5.187e-3138.54Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH7.490e-3036.56Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.845e-2835.26Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME2.255e-2632.81Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76A2_SOLME5.554e-2530.53Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C76C1_ARATH2.334e-2330.37Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C80B1_ESCCA5.748e-2229.73(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C80B2_ESCCA3.726e-2129.19(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C93A3_SOYBN1.161e-1428.04Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02008E06SK IF1 Citrus clementina cDNA clone C02008E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289049 ID=CX289049; Name=CX289049; organism=Citrus clementina; type=EST; length=588bp
TTCGGCACGAGGGACCACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAG
AAATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAACAATCCCAGAC
GCAATCTACGCCCACGGCCATCATGAATTCGGGATGCCCTGGCTGCCTGT
GGCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTCACATGCTTTCT
CTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAA
GATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATACA
TATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGATATCCAACACAA
TTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGTTT
AAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTGTC
CGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCGTC
GCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGATT
GATCAACGATTGAAGCAAAGACAAGAACGAGATTTCAC
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