CX289055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 5.046e-44 Identity = 90/118 (76.27%), Postives = 90/118 (76.27%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRPAHYHVLWDEN FTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS V AAVRPLPALKENVKRVMFYC Sbjct: 934 GIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS---GSMASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC 1048
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.623e-42 Identity = 87/118 (73.73%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRPAHYHVLWDENKFTADGLQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDS V AVRPLP LKENVKRVMFYC Sbjct: 967 GIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGAHTRGGGPLPGARSTKPAGNV--AVRPLPDLKENVKRVMFYC 1082
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 2.769e-42 Identity = 87/118 (73.73%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRPAHYHVLWDENKFTAD LQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS AVRPLPALKENVKRVMFYC Sbjct: 1004 GIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAG---NVAVRPLPALKENVKRVMFYC 1118
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.163e-40 Identity = 83/118 (70.34%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GI+GTSRPAHYHVLWDEN FTAD LQ LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDS GAAV+PLPALK++VKRVMFYC Sbjct: 896 GIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSSSVVSGPGVRGPLSGSSTSRTRAPG--GAAVKPLPALKDSVKRVMFYC 1011
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.888e-39 Identity = 80/118 (67.80%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRPAHYHVLWDEN FTADG+QSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY+EPE V+PLPALKENVKRVMFYC Sbjct: 883 GIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPEIMQDNGSPGKKNTKTTTVG------------DVGVKPLPALKENVKRVMFYC 988
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.383e-39 Identity = 80/118 (67.80%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GI+GTSRPAHYHVLWDEN FTAD LQ+LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME ++SDS G AVRPLPALK++VK VMFYC Sbjct: 927 GIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMESDSSDSGSMASGRGGGSSTSRSTRAAG------GGAVRPLPALKDSVKNVMFYC 1038
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 8.337e-39 Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ G +V+PLPA+KE VKRVMFYC Sbjct: 878 GIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTN----------------GTSVKPLPAVKEKVKRVMFYC 979
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 9.539e-35 Identity = 75/118 (63.56%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRPAHYHVL DEN FTAD LQ LTNNLCYTYARCT+SVSIVPPAYYAHLAAFRAR+YME E SD VG + LPA+K+NVK VMFYC Sbjct: 895 GIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDG---------------GSSRSRSSTTGVGQVISQLPAIKDNVKEVMFYC 997
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34 Identity = 73/118 (61.86%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRP HYHVL+DEN FTAD LQSLTNNLCYTYARCTR+VS+VPPAYYAHLAAFRAR+Y+E E+SD VR LP +KENVK VMFYC Sbjct: 953 GIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGP------------VEVRQLPKIKENVKDVMFYC 1058
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO14_ORYSJ (Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.871e-32 Identity = 71/118 (60.17%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 GIQGTSRP HYHVL DEN+F+AD LQ LT NLCYTYARCTRSVS+VPPAYYAHLAAFRAR+Y EP D AVR LP +KENVK VMFYC Sbjct: 946 GIQGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQP-----------PAVRRLPQIKENVKDVMFYC 1052 The following BLAST results are available for this feature:
BLAST of CX289055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289055 ID=CX289055; Name=CX289055; organism=Citrus clementina; type=EST; length=506bpback to top |