CX289057

Overview
NameCX289057
Unique NameCX289057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length495
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289057 vs. ExPASy Swiss-Prot
Match: AMPN_ECOLI (Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.180e-28
Identity = 68/164 (41.46%), Postives = 95/164 (57.93%), Query Frame = 2
Query:    5 LTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVESVRRLLDHPAFDLRNPNKVYSLIGGFCGS-PMNFHAKDGSGYKFLGEMVVQLDKIN 493
            L  + N     EY   H ++A+R L+N  L +LA  E      L  +++  A NMT+  AAL+A V      RD ++ ++  KW  + LV++KWF LQA S     +E+VR LL H +F + NPN++ SLIG F GS P  FHA+DGSGY FL EM+  L+  N
Sbjct:  656 LLAIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRN 819          
BLAST of CX289057 vs. ExPASy Swiss-Prot
Match: AMPN_HAEIN (Aminopeptidase N OS=Haemophilus influenzae GN=pepN PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.198e-25
Identity = 59/153 (38.56%), Postives = 91/153 (59.48%), Query Frame = 2
Query:   38 EYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVESVRRLLDHPAFDLRNPNKVYSLIGGFCGSPMN-FHAKDGSGYKFLGEMVVQLDKIN 493
            +Y     ++A R ++N+ L YLA     +   L  + Y  A NMT+  AAL+   +     RD +L DF  KWQHD LV++KWFALQA       +E ++ L+DHP+F+  NPN++ SL+G F    +  FH   GSGY+FL +++++L++ N
Sbjct:  668 DYQVTQQDIALRVMRNLCLTYLAYTNLGN--NLVQKHYNNANNMTDTLAALSVATKAALLCRDVLLADFEQKWQHDGLVMDKWFALQATRPDDNVLEIIQLLMDHPSFNFNNPNRLRSLVGSFANHNLKAFHNVSGSGYRFLTDVLIRLNESN 818          
BLAST of CX289057 vs. ExPASy Swiss-Prot
Match: AMPN_CAUCR (Aminopeptidase N OS=Caulobacter crescentus GN=pepN PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 6.848e-19
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 2
Query:   35 GEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVESVRRLLDHPAFDLRNPNKVYSLIGGFCG-SPMNFHAKDGSGYKFLGEMVVQLDKIN 493
            GE+  +     RRAL+N     L++   A+ +   L  +  A NMT+    L  +V   G  R++ L+ F+  W+ + LV++KWFA+Q     P  +E V  L  HP F+  NPN++ +L+  F   +P  FH   G+GY FL + ++++D  N
Sbjct:  659 GEFSSDAAAAGRRALRNACAEALSADPHAENLARLLGHFGAARNMTDMIGGLYPMVAMGGVPREKALESFHHAWRTEPLVLDKWFAVQGRDPNPDALERVIALTQHPDFEPTNPNRLRALVSTFANFNPARFHDPSGAGYAFLADEILKVDAFN 812          
The following BLAST results are available for this feature:
BLAST of CX289057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AMPN_ECOLI6.180e-2841.46Aminopeptidase N OS=Escherichia coli (strain K12) ... [more]
AMPN_HAEIN2.198e-2538.56Aminopeptidase N OS=Haemophilus influenzae GN=pepN... [more]
AMPN_CAUCR6.848e-1932.47Aminopeptidase N OS=Caulobacter crescentus GN=pepN... [more]
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Properties
Property NameValue
Genbank descriptionC02008F02SK IF1 Citrus clementina cDNA clone C02008F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289057 ID=CX289057; Name=CX289057; organism=Citrus clementina; type=EST; length=495bp
GTTTTTAACCACAGTGGAAAATAATAGGAGCACAGGAGAGTACGTGTTTA
ATCATCATAATATGGCCAGGCGTGCTTTGAAGAATATTGCACTTGCCTAT
CTTGCATCACTTGAAGATGCTGATATTGTGGAGCTTGCATTGCGGGAATA
TAAAACTGCCACAAATATGACGGAACAATTTGCAGCTTTGGCAGCAATTG
TCCAGAAGCCTGGTAAAATTCGAGATGAGGTGTTGGATGATTTCTATGGC
AAGTGGCAGCATGACTATTTGGTTGTGAATAAATGGTTTGCTCTTCAAGC
CATGTCTGACATCCCTGGTAATGTTGAGTCTGTCCGGAGGCTATTGGACC
ATCCAGCGTTTGATCTGCGTAATCCAAACAAGGTATACTCGCTCATTGGA
GGATTTTGTGGTTCCCCCATGAATTTCCACGCAAAGGATGGCTCCGGCTA
TAAGTTCTTGGGTGAAATGGTGGTCCAATTAGACAAAATTAATCC
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