CX289070

Overview
NameCX289070
Unique NameCX289070
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10837 contig Ccv1_Contig10837:55..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.556e-42
Identity = 82/153 (53.59%), Postives = 116/153 (75.82%), Query Frame = 1
Query:   43 MHVSINVPEVKLSSASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNGVWEA 501
            M  +I +P +   ++S  ++MPV+G+GSA D   ++  K A++EA+K GYRHFDTA+ YG+E+ALGEA+ EA+ LGLV SR++LF+T+KLW ++ H  LV+ AL+KSLKTLQ+EY+DLYLIHWP+S++P  K    I  EDL+P D  GVWE+
Sbjct:    1 MAAAIEIPTIVFPNSSAQQRMPVVGMGSAPDFTCKKDTKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLV-SRQDLFVTSKLWVTENHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQPG-KFSFPIEVEDLLPFDVKGVWES 151          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.452e-29
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNI-DERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVP-LDYNGVW 495
            +PEV  S     + MP +G+G+A           +A+L AI+LGYRHFDTA +Y TE  +GEA+AEA++ GL+ASR ++F+T+K+WCSD H   VV A +++L+ L ++YVDL L+HWP+S  P        P+E ++P  D  GVW
Sbjct:    4 IPEVPASELI--QTMPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPG-NYDFPFPKEVILPSFDMEGVW 147          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.509e-29
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 1
Query:   61 VPEVKLSSASGHRKMPVIGLGSAVDNI-DERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVP-LDYNGVW 495
            +PEV  S+      MP IG+G+A           +A+L AI+LGYRHFDTA LY TE  + EA+AEA++ GLVASR ++F+T+KLWCSD H   VV A +++L+ L ++YVDL L+HWP +  P        P+E++ P  D  GVW
Sbjct:    6 IPEVPASALLP--TMPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPG-SYDFPFPKEEMAPAFDMEGVW 149          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 8.799e-25
Identity = 63/114 (55.26%), Postives = 83/114 (72.81%), Query Frame = 1
Query:   85 ASGHRKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAK 426
            +SG+ +MPVIGLG  +  +++  +K  +L AIK+GYRHFD A+ Y +E  +GEA+AEA K GLV  REELFITTK+W SD     VV A K SL+ LQI+Y+DLYL+H+PM  K
Sbjct:    7 SSGY-EMPVIGLG--LWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLV-KREELFITTKIWNSD--HGHVVEACKNSLEKLQIDYLDLYLVHYPMPTK 114          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 2.396e-22
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +KMP+IGLG+      +  +K+A+  A+  GYRH D AS+YG E  +GEA+ E++  G    REELF+T+KLW +  H + V  AL+K+L  LQ+EY+DLYL+HWP
Sbjct:   12 QKMPLIGLGTWKSEPGQ--VKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.130e-22
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +KMP+IGLG+     D   +K+A+  A+ +GYRH D A++YG E  +GEA+ E +  G +  REELF+T+KLW +  H + V  AL+K+L  LQ+EY+DLYL+HWP
Sbjct:   12 QKMPLIGLGTWKS--DPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.088e-22
Identity = 50/106 (47.17%), Postives = 74/106 (69.81%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +KMP+IGLG+      +  +K+A+  A+ +GYRH D AS+YG E  +GEA+ E++  G    REELF+T+KLW +  H + V  A++K+L  LQ+EY+DLYL+HWP
Sbjct:   12 QKMPLIGLGTWKSEPGQ--VKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWP 115          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AKCL2_MOUSE (1,5-anhydro-D-fructose reductase OS=Mus musculus GN=Akr1e2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.972e-22
Identity = 58/129 (44.96%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  103 MPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVPLDYNG 489
            +P +GLG+   +  E  +  AV  AI LGYRHFD A LY  E  +G  I+E +K G+V  RE+LF+ +KLWC+   + LV  A   +L+ L ++Y+DLYLIHWPM  KP EK          +PLD NG
Sbjct:    4 IPTVGLGTWKASPGE--VTDAVKLAINLGYRHFDCAYLYHNESEVGMGISEKIKEGVV-KREDLFVVSKLWCTCHKKSLVKTACTNTLEALNLDYLDLYLIHWPMGFKPGEK---------DIPLDRNG 120          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.106e-22
Identity = 56/137 (40.88%), Postives = 86/137 (62.77%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLV--PLDYNGVWEA 501
            +K+P+IGLG+      +  +K AV  A+ +GYRH D A +YG E  +GEAI E++      SREE+F+T+KLW +  H D V  AL+K+L+ LQ++Y+DLYL+HWP + K  +++    P+  +     DY   W+A
Sbjct:   14 QKIPLIGLGTWKSAPGQ--VKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWPYAFKRGDQIFPQNPDGSVQYDLTDYKDTWKA 148          
BLAST of CX289070 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 9.106e-22
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 1
Query:   97 RKMPVIGLGSAVDNIDERAMKSAVLEAIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVRALKKSLKTLQIEYVDLYLIHWP 414
            +KMP+IGLG+      +  +K+A+  A+ +GYRH D A++YG E  +GEA+ E +  G    REELF+T+KLW +  H + V  AL+K+L  LQ+EY+DLYL+HWP
Sbjct:   12 QKMPLIGLGTWKSEPGQ--VKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP 115          
The following BLAST results are available for this feature:
BLAST of CX289070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
6DCS_SOYBN3.556e-4253.59NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
NADO1_ORYSJ3.452e-2944.90Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
NADO2_ORYSJ4.509e-2946.26Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
S6PD_MALDO8.799e-2555.26NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
AK1A1_MOUSE2.396e-2248.11Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_BOVIN3.130e-2248.11Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_RAT4.088e-2247.17Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AKCL2_MOUSE6.972e-2244.961,5-anhydro-D-fructose reductase OS=Mus musculus G... [more]
AK1A1_XENTR9.106e-2240.88Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_PIG9.106e-2247.17Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]

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Properties
Property NameValue
Genbank descriptionC02008G05SK IF1 Citrus clementina cDNA clone C02008G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289070 ID=CX289070; Name=CX289070; organism=Citrus clementina; type=EST; length=501bp
AAACAAACGAACAGGATCAACATGGCTGCGAATTCCGAACCGATGCATGT
ATCCATCAACGTCCCAGAAGTAAAGCTCAGCTCCGCCTCCGGTCACCGGA
AGATGCCGGTGATCGGACTGGGCTCGGCGGTGGACAACATAGATGAAAGG
GCCATGAAATCAGCAGTACTGGAAGCGATCAAGCTCGGTTACAGACACTT
CGACACAGCTTCGCTGTACGGAACAGAGAGGGCCCTGGGAGAAGCAATAG
CTGAAGCACTTAAACTTGGGCTTGTCGCATCTCGCGAAGAGCTCTTCATT
ACTACTAAGCTCTGGTGCAGCGACGCTCATCGTGATCTCGTTGTACGCGC
TCTGAAGAAGTCTCTTAAGACGCTTCAGATTGAATATGTTGACCTGTACC
TCATTCATTGGCCAATGAGTGCTAAGCCGAGTGAGAAATTACGAAACGAT
ATACCCGAAGAAGATCTTGTACCACTGGACTACAACGGTGTGTGGGAAGC
C
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