CX289123

Overview
NameCX289123
Unique NameCX289123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length202
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX289123 vs. ExPASy Swiss-Prot
Match: EMB30_ARATH (Pattern formation protein EMB30 OS=Arabidopsis thaliana GN=EMB30 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.329e-20
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:    4 KLSQDIGEMWLRLVQGLKKVCLDQREEVRNHAVLALQRSLAAVDGIRLPNALRFQCFDMATFTLLD 201
            K+SQDIGEMWLRLVQGL+KVCLDQRE+VRNHA+ +LQ+ L  VDGI L +++  QCFD   FT+LD
Sbjct: 1236 KMSQDIGEMWLRLVQGLRKVCLDQREDVRNHALQSLQKCLGGVDGINLAHSMWSQCFDKVIFTVLD 1301
The following BLAST results are available for this feature:
BLAST of CX289123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EMB30_ARATH2.329e-2068.18Pattern formation protein EMB30 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC02009D09SK IF1 Citrus clementina cDNA clone C02009D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289123 ID=CX289123; Name=CX289123; organism=Citrus clementina; type=EST; length=202bp
ATTAAATTGAGCCAAGATATAGGGGAGATGTGGCTGAGGCTGGTTCAGGG
ACTGAAGAAAGTGTGTTTGGACCAAAGAGAAGAGGTGAGGAACCATGCTG
TATTGGCGTTACAGAGATCTCTGGCAGCAGTTGATGGGATTCGCCTTCCA
AATGCCTTGCGGTTCCAGTGCTTTGATATGGCGACATTCACATTGCTCGA
TG
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