CX289162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBY (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AYE) GN=clpX PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37 Identity = 78/162 (48.15%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 484 F GLEK + +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+LTEPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++P T +GT +N +++ EA Sbjct: 250 FAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=clpX PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37 Identity = 78/162 (48.15%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 484 F GLEK + +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+LTEPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++P T +GT +N +++ EA Sbjct: 250 FAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain SDF) GN=clpX PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37 Identity = 78/162 (48.15%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 484 F GLEK + +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+LTEPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++P T +GT +N +++ EA Sbjct: 250 FAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ACICU) GN=clpX PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37 Identity = 78/162 (48.15%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 484 F GLEK + +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+LTEPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++P T +GT +N +++ EA Sbjct: 250 FAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB0057) GN=clpX PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37 Identity = 78/162 (48.15%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 484 F GLEK + +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+LTEPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++P T +GT +N +++ EA Sbjct: 250 FAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB307-0294) GN=clpX PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.670e-37 Identity = 78/162 (48.15%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNAVLVDKEA 484 F GLEK + +R++ IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E+ L+Q+LTEPKNAL RQY+ +F+M NV L F D ALR +AK+A+ +NTGARGLR++LEN+L E M+++P T +GT +N +++ EA Sbjct: 250 FAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEA 405
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_AZOBR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Azospirillum brasilense GN=clpX PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 6.100e-37 Identity = 79/162 (48.77%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GL+K I++R + +SIGFGA VR D T +L V+ DL+ +GLIPEFIGR P++ +LS L+E LV++LT+PKNAL +QY+++F M +V+L F+DDALR I+ KA+ + TGARGLR+++E+IL + MF++P G S V ++LV+KE V Sbjct: 250 FAGLDKIIAQRGKGTSIGFGADVRG-------PDERSTGDILREVEPEDLLKFGLIPEFIGRLPVVATLSDLDETALVEILTKPKNALVKQYQRLFEMEDVRLEFSDDALRTISHKAIQRKTGARGLRSIMESILLDPMFDLP----GLSGVESILVNKEVV 400
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACIAD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter sp. (strain ADP1) GN=clpX PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.359e-36 Identity = 80/162 (49.38%), Postives = 107/162 (66.05%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK-IGTSSVNAVLVDKEA 484 F GLEK + +R + IGF A V+ T L + L V+ DLV +GLIPEFIGR P++ +L L+E L+Q+LTEPKNAL RQY+ +F M NV L F + ALR IAKKA+ +NTGARGLR+++EN+L E M+++P K IGT VN ++ EA Sbjct: 251 FAGLEKIVQQRHEKGGIGFNAEVKKKDETKKLAE------LFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPKNALTRQYQSLFQMENVDLVFEESALRAIAKKALERNTGARGLRSIMENVLLETMYDLPSRKDIGTVVVNEAVIRGEA 406
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ROSDO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=clpX PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.775e-36 Identity = 82/182 (45.05%), Postives = 119/182 (65.38%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 547 F GL+K I+ R + S++GFGA VR N G + ++ DL+ +GLIPEF+GR P+L +L L+ED LV +LT+PKNAL +QY+++F + + +L FTDDAL IAK+A+ + TGARGLR++LE+IL + MF++P G SV V+V++EAV S AP ++H D E Sbjct: 250 FAGLDKIIAARGKGSAMGFGADVRGNDDRG-------VGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNALVKQYQRLFELEDTELTFTDDALSAIAKRAIERKTGARGLRSILEDILLDTMFDLP----GLESVTEVVVNEEAVNSDAAP----LMIHADASKE 416
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_PSYA2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=clpX PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.744e-36 Identity = 79/168 (47.02%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R + + IGF A V + D+ +S LL+ V+ DL+ +GLIPE IGR P+L +L+ L+ED LVQ+LTEPKNAL +QYK +F M + FT +AL IAKKAMA+ TGARGLR+++EN L E M+E+P K + VLVD++ + P Sbjct: 264 FAGLDKVIQQRTEKTGIGFNADVSSK------DDSRRSSELLQQVEPEDLIKFGLIPELIGRLPVLAALTELDEDALVQILTEPKNALVKQYKYLFDMEGADITFTKEALDAIAKKAMARKTGARGLRSIVENALLETMYELPSMK----NAKTVLVDEQVINEGKTP 421 The following BLAST results are available for this feature:
BLAST of CX289162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289162 ID=CX289162; Name=CX289162; organism=Citrus clementina; type=EST; length=579bpback to top |