CX289170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 5.896e-46 Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNK 275 GALAT+DRDYGILNKVFH+ITDTHVAHHLFSTMPHYHAMEAT AIKPILGEYYQFD TPFYKA+WREA+ECLYVEPDEG KGV+WYRNK Sbjct: 296 GALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYQFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNK 386
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.240e-45 Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI 278 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYY+FD TPF KAMWREA+EC+YVEPD+ ++KGVFWY NK+ Sbjct: 292 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREARECIYVEPDQSTESKGVFWYNNKL 383
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.822e-45 Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI 278 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAME TKAIKPILG+YYQFDGTP+ KAMWREAKEC+YVEPD + KGVFWY NK+ Sbjct: 293 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQFDGTPWVKAMWREAKECIYVEPDRQGEKKGVFWYNNKL 384
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.739e-43 Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI 278 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILG+YYQFDGTP+Y AM+REAKEC+YVEPD KGV+WY NK+ Sbjct: 292 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAKECIYVEPDREGDKKGVYWYNNKL 383
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 6.997e-31 Identity = 54/88 (61.36%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWY 266 GAL+T+DRD+G LN V H++T THV HHLFS +PHYHA EA AI +LG++Y+ D TP KAMWREAKEC+++EP++G +KGV+WY Sbjct: 285 GALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHYHAKEARDAINTVLGDFYKIDRTPILKAMWREAKECIFIEPEKGRGSKGVYWY 372
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.255e-20 Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 3 GALATVDRDYG-ILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGD 242 GAL TVDR +G L+ +FH I THVAHHLFS MP YHA EAT +K +LGEYY +D +P A+WR +EC +VE D GD Sbjct: 315 GALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVVAVWRSFRECRFVE-DHGD 394
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 4.255e-20 Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 3 GALATVDRDYG-ILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGD 242 GAL TVDR +G L+ +FH I THVAHHLFS MP YHA EAT +K +LGEYY +D +P A+WR +EC +VE D GD Sbjct: 315 GALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVVAVWRSFRECRFVE-DHGD 394
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15 Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYY----QFDGTPFY--KAMWREAKECLYVEPDEGD 242 G L TVDRDYG+ N + H+I THV HHLF +PHYH EATKA KP+LG+YY + PF+ K + R K+ YV D G+ Sbjct: 278 GGLTTVDRDYGLFNNIHHDI-GTHVIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVS-DSGE 361
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYG++N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 302 GGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 354
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYG++N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 344 GGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396 The following BLAST results are available for this feature:
BLAST of CX289170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289170 ID=CX289170; Name=CX289170; organism=Citrus clementina; type=EST; length=433bpback to top |