CX289172

Overview
NameCX289172
Unique NameCX289172
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11720 contig Ccv1_Contig11720:255..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 6.386e-69
Identity = 128/155 (82.58%), Postives = 144/155 (92.90%), Query Frame = 2
Query:   59 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            T +R+QYVY+AKLAEQAERYEEMV+FM+ LV+ +TPA ELTVEERNLLSVAYKNVIGSLRAAWRI+SSIEQKEE RKNEEHVSLVKDYRSKVE+ELS +C  IL+LLDSHL+PSATA ESKVFYLKMKGDY+RYLAEFK GDERK AAE+TM++Y
Sbjct:    4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 8.341e-69
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 2
Query:   68 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            R+QYVY+AKLAEQAERYEEMV+FM+ LVT +TPA ELTVEERNLLSVAYKNVIGSLRAAWRI+SSIEQKEE RKN+EHVSLVKDYRSKVESELS VC  ILKLLDSHL+PSA A ESKVFYLKMKGDY+RY+AEFK GDERK AAE+TML+Y
Sbjct:    7 RDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.054e-67
Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            TREQ +YLAKLAEQAERYEEMVKFMD LV  S  ++ELTVEERNLLSVAYKNVIGSLRAAWRI+SSIEQKEEGRKNEEHV LVKDYRSKVESELSDVC  ILK+LD +L+PSA AGESKVFYLKMKGDYYRYLAEFKVG+ERK AAE+TML+Y
Sbjct:    8 TREQCLYLAKLAEQAERYEEMVKFMDRLVAVSA-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAY 159          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 3.504e-67
Identity = 130/153 (84.97%), Postives = 142/153 (92.81%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            TREQ +YLAKLAEQAERYEEMVKFMD LV  S  ++ELTVEERNLLSVAYKNVIGSLRAAWRI+SSIEQKEEGRKN+EHV LVKDYRSKVESELSDVC  ILK+LD +L+PSA+AGESKVFYLKMKGDYYRYLAEFKVG+ERK AAE+TML+Y
Sbjct:    8 TREQCLYLAKLAEQAERYEEMVKFMDKLVIGSG-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAY 159          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.020e-66
Identity = 128/153 (83.66%), Postives = 139/153 (90.85%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +REQ +YLAKLAEQAERYEEMV+FMD LV +STPA ELTVEERNLLSVAYKNVIGSLRAAWRI+SSIEQKEE RKNEEHV LVK+YR KVE+ELS VC  ILKLL+S+LVPSAT  ESKVFYLKMKGDYYRYLAEFK+GDERK AAE+TM SY
Sbjct:   10 SREQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSY 162          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 2.271e-66
Identity = 125/152 (82.24%), Postives = 140/152 (92.11%), Query Frame = 2
Query:   68 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            REQYVYLA ++EQAERYEEMV+FM  +V  STPA+ELTVEERNLLSVAYKNVIGSLRAAWRI+SSIEQKEEGRKN++HVSLVK YRSKVE+EL+ VC +IL LLDS+LVPSA+A ESKVFYLKMKGDY+RYLAEFKVGDERK A E+TMLSY
Sbjct:    6 REQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSY 157          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.577e-59
Identity = 115/154 (74.68%), Postives = 134/154 (87.01%), Query Frame = 2
Query:   62 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            P+RE+ VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE+HV+L+KDYR K+E+ELS +C  ILKLLDSHLVPS+TA ESKVFYLKMKGDY+RYLAEFK G ERK AAE+T+L+Y
Sbjct:    6 PSREENVYMAKLAEQAERYEEMVEFMEK-VARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAY 158          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.059e-59
Identity = 113/158 (71.52%), Postives = 133/158 (84.18%), Query Frame = 2
Query:   50 AMGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            A  +  RE+ VYLAKLAEQAERYEEMV+FM+ +V ++    ELT+EERNLLSVAYKNVIG+ RA+WRIISSIEQKEE R NE HVS ++DYRSK+ESELS +C  ILK+LDS L+ SA+ G+SKVFYLKMKGDYYRYLAEFK GDERK AAENT+ +Y
Sbjct:    2 AAASSPREENVYLAKLAEQAERYEEMVEFMEKVVAAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEGHVSTIRDYRSKIESELSSICDGILKVLDSKLIGSASGGDSKVFYLKMKGDYYRYLAEFKTGDERKLAAENTLSAY 159          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.059e-59
Identity = 113/153 (73.86%), Postives = 134/153 (87.58%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +RE+ VY+AKLAEQAERYEEMV++M+  V  +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEEGR NEEHV+L+K+YR K+E+ELS +C  ILKLLDSHLVPS+TA ESKVFYLKMKGDY+RYLAEFK G ERK AAE+TM++Y
Sbjct:    2 SREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAY 153          
BLAST of CX289172 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 3.512e-59
Identity = 114/153 (74.51%), Postives = 134/153 (87.58%), Query Frame = 2
Query:   65 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 523
            +RE+ VY+AKLAEQAERYEEMV+FM+  V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRIISSIEQKEEGR NE+ V+L+KDYR K+E+EL+ +C  ILKLL+SHLVPS+TA ESKVFYLKMKGDYYRYLAEFK G ERK AAENTM++Y
Sbjct:    7 SREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAY 158          
The following BLAST results are available for this feature:
BLAST of CX289172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
14338_ARATH6.386e-6982.5814-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH8.341e-6984.8714-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
1433D_TOBAC2.054e-6785.6214-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14331_SOLLC3.504e-6784.9714-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
14310_SOLLC1.020e-6683.6614-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
1433B_SOYBN2.271e-6682.2414-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
1433_LILLO1.577e-5974.6814-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
1433_HELAN2.059e-5971.5214-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
14333_ORYSJ2.059e-5973.8614-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_MAIZE3.512e-5974.5114-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]

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Properties
Property NameValue
Genbank descriptionC02010A05SK IF1 Citrus clementina cDNA clone C02010A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289172 ID=CX289172; Name=CX289172; organism=Citrus clementina; type=EST; length=523bp
GAAGAAGATCCAATTCCCCTCCAGTTAACTTTACAGTTTCTGCAATTCTG
CTATGGGAACCCCGACGAGAGAGCAATACGTTTACCTGGCGAAACTCGCC
GAGCAAGCCGAGCGCTATGAAGAGATGGTTAAGTTCATGGACAGCCTCGT
CACTTCCTCCACTCCGGCGACTGAACTCACCGTCGAGGAGCGCAACCTCC
TCTCCGTTGCTTACAAGAACGTCATCGGCTCTCTTCGCGCCGCGTGGCGT
ATTATCTCCTCTATCGAGCAGAAAGAGGAAGGCCGCAAGAACGAGGAACA
CGTCTCGCTGGTCAAAGACTATCGGTCAAAGGTAGAGTCTGAGTTATCTG
ACGTGTGCGGGAGCATATTGAAGTTGCTGGACTCGCACCTTGTGCCTTCG
GCTACTGCTGGTGAGTCCAAAGTCTTCTATTTGAAGATGAAGGGAGATTA
CTACCGTTACTTGGCGGAGTTTAAAGTTGGTGATGAGAGGAAGGCCGCCG
CTGAAAACACTATGTTGTCTTAT
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