CX289176

Overview
NameCX289176
Unique NameCX289176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9418 contig Ccv1_Contig9418:22..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.498e-47
Identity = 102/216 (47.22%), Postives = 131/216 (60.65%), Query Frame = 3
Query:   27 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPT-KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ------LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP-------DGLE-----SNKGNIFMASTSPPCVLTAYYEQFQRDF 617
            MEV+++LHMN G G TSYA NS+VQ  +IS+ + + +EA+ KL    S      IADLGCSSGPN+LL  S +++ +  +C  L   +PE  + LNDLP NDFN IF SL  F   ++K+      LG   G+ G CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP       DG+       N+G I+++ TSP      Y  QFQ DF
Sbjct:    1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDF 216          
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.402e-45
Identity = 102/213 (47.89%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   27 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL---RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP------------DGLESNKGNIFMASTSPPCVLTAYYEQFQRDF 617
            MEV++VLHMN G G TSYA NS  Q  +IS+ + + +EA+ KL  S S  + + IADLGCSSGPN+LL  S ++  ++ +C  L   +PE +V LNDLP NDFN I  SL  F   +   ++ LG   G    CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP              LE N G I+++ TSP     AY  QFQ DF
Sbjct:    1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLE-NMGKIYISKTSPKSAHKAYALQFQTDF 212          
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.660e-38
Identity = 90/198 (45.45%), Postives = 126/198 (63.64%), Query Frame = 3
Query:   39 QVLHMN-GGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS--PTKVAIADLGCSSGPNTLLVASELIKVVNKI-CDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-SNKGNIFMASTSPPCVLTAYYEQFQRDF 617
            ++L MN  G G TSYA+NS +Q+ ++S +  + +E +  +       P    + D+GCSSGPN LLV S +I  +  +  +K  ++LPEF+VFLNDLP NDFN +F+ L              S   G CF  G+PGSFYGRL P+ S+H  +SSYS+ WLSQVP+GLE +N+ NI+MA+ SPP V  AY +Q++RDF
Sbjct:    6 KLLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLL--------------SHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDNNRQNIYMATESPPEVYKAYAKQYERDF 189          
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.184e-24
Identity = 77/209 (36.84%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   39 QVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK------LFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDF 617
            Q   MNGG G  SY  NS  Q+  I   K  T EA+ +      L  ++    + I D GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+   F +              + F  GVPGSF+GR+ P+NS+H+ H+SY+L WLS VP  +   K      +    +     V  AY  QF++DF
Sbjct:    6 QSFPMNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDFGCSIGPNTFDVVQNIIDTVKQKRLKENKTYIGAPL-EFQVCFNDQPNNDFNTLFRTQPFFSR-------------KEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDF 200          
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.970e-23
Identity = 80/208 (38.46%), Postives = 104/208 (50.00%), Query Frame = 3
Query:   39 QVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK------LFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDK-----LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRD 614
            Q   MNGG G  SY  NS  Q+  I  AK  T EA+ K      L  ++    + IAD GCS GPNT  V   +I  V +   K     +G+ L EFQV  ND P NDFNT+FR+    Q I  KQ   +          GVPGSF+GR+ P+NS+H+ H +Y+L WLS VP  +   K      +    +     V  AY  QF++D
Sbjct:    6 QSFPMNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFGCSIGPNTFEVVQNIIDTVKQKNLKENNAYIGAPL-EFQVCFNDQPNNDFNTLFRT----QPISSKQAYLS---------VGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKD 199          
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.486e-23
Identity = 75/200 (37.50%), Postives = 97/200 (48.50%), Query Frame = 3
Query:   51 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK---LFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVN--KICDKLGSQLP--EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRD 614
            M+ G    SY  NS  Q+  IS A   T   + +   L  S+      IAD GCS GPNT  VA  +I  V   ++ +   + L   EFQVF ND P NDFNT+FR+                    + F  GVPGSFYGR+ PRNS+H+ H+SY+  WLS+VPD +   K      N    +     V  AY  QF +D
Sbjct:   10 MSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQLSSDFGTFRIADFGCSIGPNTFHVAQSIIDTVKSKRLEESTENSLVPLEFQVFFNDQPTNDFNTLFRT-------------QPLSPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKD 196          
BLAST of CX289176 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21
Identity = 73/203 (35.96%), Postives = 99/203 (48.77%), Query Frame = 3
Query:   51 MNGGVGGTSYASNSLVQEKVIS----IAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVN----KICDKLGSQLP-EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD------GLESNKGNIFMASTSPPCVLTAYYEQFQRD 614
            M+GG    SY  NS  Q+  I      A+    E +  L  + + +   IAD GCS GPNT      +I +V     K   +     P EFQV+ NDLP NDFNT+FR+     K              + F  GVPGSFYGR+ PRNS+H+ ++S++  WLS+VP+       L  NK N    +     V  AY  QF++D
Sbjct:   10 MSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLSTFTIADFGCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPSSK-------------QEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNK-NYIHCNNLIEEVTEAYKVQFEKD 198          
The following BLAST results are available for this feature:
BLAST of CX289176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMT_BRARP1.498e-4747.22Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH1.402e-4547.89Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA1.660e-3845.45Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT797_ARATH5.184e-2436.84Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH1.970e-2338.46Probable S-adenosylmethionine-dependent methyltran... [more]
MT810_ARATH7.486e-2337.50Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH7.007e-2135.96Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionC02010A10SK IF1 Citrus clementina cDNA clone C02010A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289176 ID=CX289176; Name=CX289176; organism=Citrus clementina; type=EST; length=618bp
GAGAAACAGAGAATACTGTGCGAGAGATGGAGGTGGTCCAAGTGCTTCAC
ATGAATGGAGGAGTAGGAGGCACAAGTTATGCCAGTAATTCACTGGTTCA
GGAAAAAGTCATATCCATTGCAAAGCCAATCACAGAGGAAGCCATGACCA
AACTCTTCTGCAGCACGTCCCCAACAAAGGTAGCAATTGCCGACTTGGGC
TGTTCTTCAGGACCAAACACTTTGCTTGTGGCATCTGAACTTATCAAAGT
AGTGAACAAGATCTGCGATAAGTTGGGCAGTCAATTACCAGAATTTCAAG
TGTTCCTGAACGATCTTCCAGGGAATGACTTTAACACCATTTTCAGGTCT
TTAGCAAGCTTCCAAAAGATACTGAGAAAGCAATTAGGGTCGGCCTCTGG
GGCAGCTGGGCAGTGCTTCTTCACTGGGGTCCCTGGTTCTTTCTATGGCA
GGCTTTTCCCTCGCAATAGTGTGCATCTTTTCCACTCTTCTTATAGTCTC
CAATGGCTATCTCAAGTTCCAGATGGACTGGAGAGCAATAAAGGGAACAT
TTTCATGGCCAGTACAAGTCCGCCATGCGTGCTTACGGCATATTACGAGC
AATTTCAAAGAGATTTTT
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