CX289179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_ARATH (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=2 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 3.323e-70 Identity = 125/154 (81.17%), Postives = 142/154 (92.21%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHDN 462 EEIP+KVSNSAL+SAFMTELE DTPV+Q DYDRL S++PFLE NMEFLI+CMDDLS+EQQKFQ+YYR+L+RQQAQQQ+WLQKRR EN ARK+AGEEPLPEEDPSNPIFK IPEP RLESFLI N+++N+C QINGV GQ+FSRLYLTKALHDN Sbjct: 184 EEIPIKVSNSALVSAFMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLESFLITNQVSNFCGQINGVAGQNFSRLYLTKALHDN 337
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_NEMVE (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis GN=v1g168210 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29 Identity = 60/153 (39.22%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 +EIP+ + NS+L++ + EL+ +TP D L LS+ +LE+N+ L+E +D+L + K+ Y RS+ RQQ Q++++LQ+R+ EN++R GE+PLP+ED S +FKP+P P RL++ L++ ++ YC ++ + QSF + +L +AL D Sbjct: 179 QEIPLVIKNSSLMNVLLCELDENTPTPSAD-QFLTLSTGSYLEKNVRVLMESVDELCQDSNKYHNYQRSVIRQQQQKENYLQRRQQENQSRIQRGEDPLPDEDLSK-MFKPLPVPSRLDNLLLSEQVNTYCQHVHQFSTQSFGKFFLAQALQD 329
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_SALSA (Eukaryotic translation initiation factor 3 subunit H OS=Salmo salar GN=eif3h PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.155e-28 Identity = 62/151 (41.06%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKAL 453 EE+P+ + NS LI+ M ELE V + ++ L LSSS LE++++ L++ +DD+S + K+ Y R+L++QQ Q+ + Q+R+ EN R+ GE PLPEED S +FKP PPR+++ LIA +I NYC + T Q+ +L++ +AL Sbjct: 191 EEVPIVIKNSHLINVLMWELEEKCTVADK-HELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTYSRNLSKQQQQKHQYTQRRQQENAQRQTRGETPLPEEDVSK-MFKPPQPPPRMDTLLIAGQINNYCQNVKEFTSQNLGKLFMAEAL 339
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EI3HA_DANRE (Eukaryotic translation initiation factor 3 subunit H-A OS=Danio rerio GN=eif3ha PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.479e-27 Identity = 61/154 (39.61%), Postives = 101/154 (65.58%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHDN 462 EE+P+ + NS LI+ M +L+ + + + ++ L LSSS LE++++ L++ +DD+S + K+ Y R+L++QQ Q+Q + Q+R+ EN R++ GE PLPEED S +FK PPR+++ LIA +I NYC I T Q+ +L++ +AL N Sbjct: 182 EEVPIFIKNSHLINVLMWDLQEKSTLADK-HELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTYCRNLSKQQQQKQQYQQRRQQENAQRQSRGEPPLPEEDISK-MFKAPQAPPRMDTLLIAGQINNYCQNIKEFTSQNLGKLFMAEALQSN 333
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EI3HB_DANRE (Eukaryotic translation initiation factor 3 subunit H-B OS=Danio rerio GN=eif3hb PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27 Identity = 60/151 (39.74%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKAL 453 EE+P+ + NS LI+ + ELE + + ++ L LSSS LE++++ L++ +DD+S + K+ Y RSL++QQ Q+ ++Q+R+ EN R++ GE PLPEED + +FKP PPR+++ LIA++I YC I T Q+ +L++ +AL Sbjct: 180 EEVPIVIKNSHLINVLLWELEEKSTAADK-HELLSLSSSSHLEKSLQMLMDRVDDMSQDIVKYNNYSRSLSKQQQQKHQYVQRRQQENAQRQSRGEPPLPEEDLTK-MFKPPQPPPRMDTLLIASQINTYCQTIKEFTSQNLGKLFMAEAL 328
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_TAEGU (Eukaryotic translation initiation factor 3 subunit H OS=Taeniopygia guttata GN=EIF3H PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26 Identity = 60/153 (39.22%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ + ELE + V R ++ L L+SS L ++++ L++ +D++S + K+ Y R++++QQ Q+ + Q+R+ EN R++ GE PLPEED N +FKP PPR+ES LIA +I YC I Q+ +L++ +AL D Sbjct: 195 EEVPIVIKNSYLINVMLWELEKKSAVADR-HELLSLASSNHLGKSLQLLMDRVDEMSQDIVKYNTYLRNVSKQQQQKHQYQQRRQQENIQRQSRGEPPLPEED-INKLFKPPQPPPRMESLLIAGQINTYCQNIKEFNAQNLGKLFMAQALQD 345
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_XENLA (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis GN=eif3h PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.569e-26 Identity = 59/153 (38.56%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ + EL+ PVT++ ++ L LSSS LE++++ L++ +D++S + K+ Y R++ +QQ Q+ + Q+++ EN R + GE PLPEED N +FKP P R++ LIA +I Y I G T Q+ +L++ +AL D Sbjct: 181 EEVPIVIKNSHLINVLVWELDKKAPVTEK-HELLNLSSSNHLEKSLQLLMDRVDEMSQDIVKYNTYQRNVGKQQQQKHQYTQRKQQENLQRLSRGETPLPEED-VNKMFKPPVTPSRMDPLLIAGQINTYIQHIKGFTSQNLGKLFMAEALQD 331
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_HUMAN (Eukaryotic translation initiation factor 3 subunit H OS=Homo sapiens GN=EIF3H PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 59/153 (38.56%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ M ELE + V + ++ L L+SS L +N++ L++ +D++S + K+ Y R+ ++QQ Q+ + Q+R+ EN R++ GE PLPEED S +FKP P R++S LIA +I YC I T Q+ +L++ +AL + Sbjct: 199 EEVPIVIKNSHLINVLMWELEKKSAVADK-HELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSK-LFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_CHICK (Eukaryotic translation initiation factor 3 subunit H OS=Gallus gallus GN=EIF3H PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.462e-25 Identity = 59/153 (38.56%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ + ELE + V R ++ L L+SS L ++++ L++ +D++S + K+ Y R++++QQ Q+ + Q+R+ EN R++ GE PLPEED N +FKP P R+ES LIA +I YC I Q+ +L++ +AL D Sbjct: 195 EEVPIVIKNSYLINVMLWELEKKSAVADR-HELLSLASSNHLGKSLQLLMDRVDEMSQDIVKYNTYLRNVSKQQQQKHQYQQRRQQENLQRQSRGEAPLPEED-INKLFKPPQPPARMESLLIAGQINTYCQNIKEFNAQNLGKLFMAQALQD 345
BLAST of CX289179 vs. ExPASy Swiss-Prot
Match: EIF3H_XENTR (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis GN=eif3h PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.909e-25 Identity = 59/153 (38.56%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ EL+ PVT++ ++ L LSSS LE++++ L++ +D+LS + K+ Y R++++QQ Q+ + Q+R+ EN R++ GE LPEED N +FKP P R++S LIA +I Y I T Q+ +L++ +A+ D Sbjct: 182 EEVPIIIKNSHLINVLAWELDKKAPVTEK-HELLNLSSSNHLEKSLQLLMDRVDELSQDIVKYNTYLRNISKQQQQKHQYTQRRQQENLQRQSRGETSLPEED-VNKLFKPPVPPSRMDSLLIAGQINTYIQHIKEFTSQNLGKLFMAEAMQD 332 The following BLAST results are available for this feature:
BLAST of CX289179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289179 ID=CX289179; Name=CX289179; organism=Citrus clementina; type=EST; length=585bpback to top |