CX289183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3_CAEEL (Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis elegans GN=nst-1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.155e-33 Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDA-SIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSE-----ARIVSELGKEFNVNEVYKNESSFIGSLKSVDD 508 NVG PG+T+ +QEV+LDKN++L+D PGV+++ + D +AL+N R++ L DP+ PV IL RC ++ Y L F+SVD FL ++A GKL++G DV AAA+ +L+DWN GK+ YYT PP +QG E A +VS+ KEF+++ + + ++ + L D Sbjct: 286 NVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLADFNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPP--EQGTAKEDIVVPAEVVSQFSKEFDIDAIAEEQNQIVEGLPMESD 458
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3_DICDI (Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN=gnl3 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.277e-32 Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARIVSELGKEFNVNE-----VYKNESSFIGSLKSVDDFQ 514 VGATPG T+ QEV LDKNVKLLD PG+V +K G D +I LRN ++EK+ DP+ PV IL+RC ++ +Y++ + S DFL +VA R K+ KGGI D+ + A ++ DW GKIP+YT PP + ++ ++S+ E N+++ N+++ SLK ++ Q Sbjct: 291 VGATPGFTKFAQEVHLDKNVKLLDSPGIVPIK-GNVDENIILRNVVKLEKVLDPIAPVDAILSRCSQKQILDIYEIAQYQSTTDFLTQVAAKRKKIVKGGIADLRSTAISVIRDWTGGKIPFYTQPPK----VLVKSTLLSQFSDELNIDQSDLISTVSNQNTSFASLKYLEPKQ 460
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3_DROME (Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila melanogaster GN=ns1 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.255e-29 Identity = 64/162 (39.51%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQG--IPSEARIVSELGKEFNVNEVYKNESSFI 484 VG+TPG+T+SMQEV+LD +KL+DCPG+V GEN ++ L+N +R+ + DP + +L R ++Y + ++D+ ++F K A GK K G+ DV AAAR +L+DWN GKI Y T PP +G + A IV +EF+V E+ + Sbjct: 295 VGSTPGVTKSMQEVELDSKIKLIDCPGIVFTSGGENSHAV-LKNAQRVGDVKDPFTIAESVLKRASKEYFCTMYDITNYDTFEEFFAKKAARMGKFLKKGVPDVVAAARSVLNDWNTGKIKYCTQPPEVQEGQSVHISASIVHSEAREFDVENFESMETEIL 455
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3L_BOVIN (Guanine nucleotide-binding protein-like 3-like protein OS=Bos taurus GN=GNL3L PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.253e-28 Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSELGKEFNVNE 457 +VGA PG+T+ MQEV LDK ++LLD PG+V ++ LRNC ++KL DPV PV+ IL RC + S Y + F + + FL VA GK KKGGI E AA+ +L DW GKI +YT+PP+ +P+ A IV E+ + F++ + Sbjct: 272 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV--PGPNSEVGTILRNCIHVQKLADPVTPVETILQRCNLEEISSYYGVSGFQTTEHFLTAVAHRLGKKKKGGIYSQEQAAKAVLADWVSGKISFYTLPPS-THTLPTHLSAEIVKEMTEVFDIED 422
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3L_MOUSE (Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus GN=Gnl3l PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.237e-27 Identity = 68/162 (41.98%), Postives = 97/162 (59.88%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSELGKEFNVNEV-YKNESS 478 +VGA PG+T+ MQEV LDK ++LLD PG+V ++ LRNC ++KL DPV PV+ IL RC + S Y + F + + FL VA GK KKGG+ E AA+ +L DW GKI +YT+PP +P+ A IV E+ + F++ + + NE + Sbjct: 273 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV--PGPNSEVGTILRNCIHVQKLADPVTPVETILQRCNLEEISSYYGVSGFQTTEHFLTAVAHRLGKKKKGGVYSQEQAAKAVLADWVSGKISFYTLPPP-THTLPTHLSAEIVKEMTEVFDIEDTEHANEDT 431
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3L_HUMAN (Guanine nucleotide-binding protein-like 3-like protein OS=Homo sapiens GN=GNL3L PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.047e-26 Identity = 65/154 (42.21%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSELGKEFNVNE 457 +VGA PG+T+ MQEV LDK ++LLD PG+V ++ LRNC ++KL DPV PV+ IL RC + + Y + F + + FL VA GK KKGG+ E AA+ +L DW GKI +Y PPA +P+ A IV E+ + F++ + Sbjct: 279 SVGAVPGITKFMQEVYLDKFIRLLDAPGIV--PGPNSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPPA-THTLPTHLSAEIVKEMTEVFDIED 429
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GNL3_DANRE (Guanine nucleotide-binding protein-like 3 OS=Danio rerio GN=gnl3 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.014e-21 Identity = 61/167 (36.53%), Postives = 92/167 (55.09%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSELGKEFNVNEVYKNESSFIGSLK 496 N G GLTR MQEV + K VK++D PG++ S A +ALR+ + EK + P V+ +L +C ++ Y +P + S +FL A G L+KGG+ D E AA L+DW K+ YY+ P R QG+PS IV+EL + +++ V K + S++ Sbjct: 288 NAGVQRGLTRCMQEVHITKKVKMIDSPGILAALSNPGSA-MALRSLQVEEKEESPQEAVRNLLKQCNQQHVMLQYNVPDYRSSLEFLTTFAMKHGLLQKGGVADTELAATTFLNDWTGAKLSYYSRVPER-QGLPSYLSDAIVTELQSDVDMDAVKKGNENVKRSVR 452
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: GRN1_SCHPO (GTPase grn1 OS=Schizosaccharomyces pombe GN=grn1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.115e-19 Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 2 Query: 8 GATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDA--SIALRNCKRIEKLDDPVGP---VKEILNRCPANL--LISLYKLP------SFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSE---ARIVSELGKEFNVNE 457 G G+T S++EV+LD ++L+D PG+V S D + + N K+DDPV + + L+R P L + Y+LP D+ DFL +A RG+L +GGI ++ AAA I+++DW+ G+I ++ P ++ SE +IV+E KEF++N+ Sbjct: 304 GNVAGMTTSLREVKLDNKLRLVDSPGIVFPSSDSKDDLYRLVMLNAVSSTKVDDPVAVASYILQFLSRVPGQLERMFQRYELPPLLNTSDIDTATDFLVNIARKRGRLGRGGIPNLNAAANIVINDWHAGRIEWWAEPEVINEKNSSEVQDTQIVTEWAKEFDLND 469
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: NOG2_HUMAN (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.763e-19 Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPP 385 NV G T+ Q + L + + L+DCPGVV S +++ I L+ ++EK+ P + +L R + YK+ S+++ +DFL+K+A GKL KGG D++ +++L+DW G+IP++ PP Sbjct: 337 NVAPIAGETKVWQYITLMRRIFLIDCPGVVY-PSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPP 463
BLAST of CX289183 vs. ExPASy Swiss-Prot
Match: NOG2_MOUSE (Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.608e-19 Identity = 46/140 (32.86%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARI 421 NV G T+ Q + L + + L+DCPGVV S +++ I L+ ++EK+ P + +L R + YK+ S+++ +DFL+K+A GKL KGG D+ ++++L+DW G+IP++ PP + IP+++++ Sbjct: 337 NVAPIAGETKVWQYITLMRRIFLIDCPGVVY-PSEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWENAEDFLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGRIPFFVKPPNAE--IPTDSQL 473 The following BLAST results are available for this feature:
BLAST of CX289183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289183 ID=CX289183; Name=CX289183; organism=Citrus clementina; type=EST; length=526bpback to top |