CX289212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.861e-41 Identity = 82/143 (57.34%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH+ G L +C+ETRP+NQGSRLTA+ELV+++IP M++ +V+AV+VGADRV ANGDT NKIGTY LA+ AK+H Sbjct: 128 AESLLKKDVEDNQMIGDFGAKHILEKAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLHALGRLSHVFCTETRPYNQGSRLTAYELVYEKIPATLITDSMASVTMRERKVTAVVVGADRVVANGDTANKIGTYQLAIIAKYH 270
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.227e-40 Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH G L +C+ETRP+NQGSRLTA+ELV+++IP ++D +V+AV+VGADRV ANGDT NKIGTY LA+ A++H Sbjct: 128 AEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLHVLGRLSHVFCTETRPYNQGSRLTAYELVYEKIPATLITDSMASAAIRDRKVTAVVVGADRVVANGDTANKIGTYQLAITARYH 270
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.227e-40 Identity = 85/144 (59.03%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH G LE +C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NKIGTY LA+ AK H Sbjct: 129 AEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEKIPATLITDSMAAAAMVHQGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHH 272
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.227e-40 Identity = 85/144 (59.03%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH G LE +C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NKIGTY LA+ AK H Sbjct: 129 AEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHH 272
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.909e-40 Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 9 EIMLKDDVATNKAIGSYGASFLQNQLKNS--KFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 E ML+ D+ N++IG GA L ++ S K +VLTHCNTG+LATAGYGTALGVIR+LHS G LE A+C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NK+GTY LA+ AK H Sbjct: 130 EDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHAFCTETRPYNQGARLTAFELVYEQIPATLITDSMVAAAMAHRGVSAVVVGADRVVANGDTANKVGTYQLAIVAKHH 272
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_SCHPO (Methylthioribose-1-phosphate isomerase OS=Schizosaccharomyces pombe GN=mri1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.799e-40 Identity = 84/141 (59.57%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQLKNS-KFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAK 425 AE ML D+ N IG+ G FL K+ K +VLTHCNTGSLAT+GYGTALG+IR+LH G LE AYC+ETRP+NQGSRLTAFELVHD+IP +M ++ A++VGADRV NGDT NKIGTY+LA+ AK Sbjct: 119 AERMLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYGTALGIIRSLHESGNLEHAYCTETRPYNQGSRLTAFELVHDKIPATLVTDSTVASIMH--KIDAIVVGADRVTRNGDTANKIGTYNLAILAK 257
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_BOVIN (Methylthioribose-1-phosphate isomerase OS=Bos taurus GN=MRI1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.962e-40 Identity = 84/144 (58.33%), Postives = 103/144 (71.53%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AE ML D+ N++IG GA L + + K +VLTHCNTG+LATAGYGTALGVIR+LH+ G LE A+C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NK+GTY LA+ AK H Sbjct: 129 AEDMLDKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLHNLGRLEHAFCTETRPYNQGARLTAFELVYEQIPATLIADSMAAAAMAHQGVSAVVVGADRVVANGDTANKVGTYQLAIAAKHH 272
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_METCA (Methylthioribose-1-phosphate isomerase OS=Methylococcus capsulatus GN=mtnA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.652e-35 Identity = 79/143 (55.24%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 3 AAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 AA + +DD+A N A+G GA+ L VLTHCNTG+LAT GYGTALGVIR+ G LER Y +ETRP++QG+RLT +EL DRIP LMK G V V+VGADR+AANGD NKIGTYSLA+ A+ H Sbjct: 129 AARRIHEDDLAANLAMGELGAAIL-----GGCKGVLTHCNTGALATGGYGTALGVIRSTWRRGALERVYATETRPWSQGARLTVWELGQDRIPATLLADSAAAWLMKSGAVQWVVVGADRIAANGDVANKIGTYSLAVLARHH 266
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_CLOTH (Methylthioribose-1-phosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=mtnA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.398e-34 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 6 AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHN 434 A +M K+D+ +N++IG +G N+L +++LTHCN G+LAT YGTALGVIRA H G + + ETRP+ QG+RLTA+EL+ D IP MK+G + VIVGADR+A NGDT NKIGTYSLA+ AK +N Sbjct: 123 AYLMEKEDIESNRSIGRFG-----NELIKENWTILTHCNAGALATCDYGTALGVIRAAHESGKNIQVFADETRPYLQGARLTAWELMQDNIPVTLICDNMAGHFMKEGLIDCVIVGADRIALNGDTANKIGTYSLAVLAKENN 260
BLAST of CX289212 vs. ExPASy Swiss-Prot
Match: MTNA_THISH (Methylthioribose-1-phosphate isomerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=mtnA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.826e-34 Identity = 74/137 (54.01%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 21 KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFH 431 +DD+A N+ +G GA+ L + +VLTHCNTGSLAT GYGTALGVIR+ + + +++ Y ETRP+ QG+RLTA+ELV D IP LM+ GRV V+VGADR+AANGDT NKIGTY+LA+ A+ H Sbjct: 133 EDDLADNRRMGELGAA-----LMDPAEAVLTHCNTGSLATGGYGTALGVIRSAYGQQRIKKVYADETRPWLQGARLTAWELVQDGIPVDLICEGAAASLMRSGRVGWVVVGADRIAANGDTANKIGTYALAVLARHH 264 The following BLAST results are available for this feature:
BLAST of CX289212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289212 ID=CX289212; Name=CX289212; organism=Citrus clementina; type=EST; length=434bpback to top |