CX289214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.634e-45 Identity = 81/138 (58.70%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVIV 414 TYVFTK+MGEMLL +Y++NLPI+IIRPTMITST+ EPFPGWIEGLRTID ++ YGKG++ C + ++LDLIP D+V N+M+ A +A SQ +YHVGSS +NPI F QIH+ A YFTKNP + + G+ ++V Sbjct: 236 TYVFTKSMGEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSILV 373
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.905e-45 Identity = 79/138 (57.25%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVIV 414 TYVFTKAMGEML+ Y++NLP++IIRPTMITST EPFPGWIEGL+T+D ++ YGKG++ C +S ++ DLIPAD+VVN+M+ A A++ + Q IYHVGSS +NP+ F Q+H+F YF K P I + G+P+IV Sbjct: 234 TYVFTKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPLIGRNGSPIIV 371
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.395e-41 Identity = 78/138 (56.52%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVIV 414 TYVFTK+MGEMLL +K+NLP++IIRPTMITST EPFPGWIEGLRT+D +I YGKG + C V+ ++ D+IP D+V N+MI A +A M+YHVGSS +NP+ F +IHE A YFTKNP + G+ + V Sbjct: 237 TYVFTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYFTKNPLRSRNGSLITV 374
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR7_ARATH (Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.909e-39 Identity = 71/137 (51.82%), Postives = 101/137 (73.72%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVI 411 TYVFTKAMGEMLL HY++ +PI+IIRPT+ITST+ +PFPGWIEGL+T+D +I YGKG + C V+ +T+ D+IP D+VVN+MI + ++ S +YHVGSS +NP+ + QI+E YF K+P + + G ++ Sbjct: 163 TYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKGILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVGRNGMLIV 299
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.482e-39 Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVIV 414 TYVFTK+MGEMLL ++K+NLP++IIRPTMITST EPFPGWIEGLRT+D +I YGKG + C V+ ++ D+IPAD+V N+MI A +A M+Y VGSS +NPI + +I E F YFTKN + G+ + V Sbjct: 237 TYVFTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNSLRSRNGSMITV 374
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.952e-35 Identity = 69/138 (50.00%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVIV 414 TYVFTKAMGEM++ ++NL ++++RP++ITST+KEPFPGW EG+RTID + YGKGK+ C + + D++PAD+VVNS++++M A A ++IYHVGSSLRNP+ + E A+ YF+ P+ +K G V V Sbjct: 240 TYVFTKAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSMAAQAGK-QEEIIYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVVKV 376
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR2_ARATH (Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 4.656e-29 Identity = 57/142 (40.14%), Postives = 101/142 (71.13%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANA---NNPSSQM-IYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVIV 414 TYVFTKAMGEM+++ + ++P++IIRP++I STYK+PFPGW+EG R +D ++ YGKG++ V+ + +LD++PAD+VVN+ + A+ + ++P ++ +Y + SS NP+ F + E ++++ +P +D G+P++V Sbjct: 356 TYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYNHYKTSPCMDSKGDPIMV 497
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR6_ARATH (Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.358e-20 Identity = 47/128 (36.72%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMIMAMVANANNPSSQMIYHVGSSLR-NPIHFFQIHEFAFHYFTKNP 381 +Y FTKA+GE ++ + NLP++IIRP++I S+Y EPFPGWI+G R D ++ Y KG+I + Q+++D+IP D+V N+ I AM + +Y++ SS NP+ ++ + + + P Sbjct: 299 SYTFTKAIGEAVIHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMDIIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFP 426
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR1_RAT (Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.149e-19 Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 1 TYVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVN-SMIMAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNPVI 411 TY++TKA+ E ++ L + I+RP+++ +++KEPFPGWI+ I GKG + + ++ + DL+P DVVVN S+ A + N P + M+Y+ + NP H+ ++ ++ H F NP + +P + Sbjct: 203 TYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSFKTNPLNQVFRHPYV 340
BLAST of CX289214 vs. ExPASy Swiss-Prot
Match: FACR2_HUMAN (Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.660e-18 Identity = 44/135 (32.59%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 4 YVFTKAMGEMLLDHYKDNLPIIIIRPTMITSTYKEPFPGWIEGLRTIDVPLITYGKGKIDCLPVNSQTILDLIPADVVVNSMI-MAMVANANNPSSQMIYHVGSSLRNPIHFFQIHEFAFHYFTKNPYIDKYGNP 405 Y +TKA+GEM++ NL I IIRP+++ +T++EPFPGW++ + + +I GKG + + + D+IP D VVN M+ + + P S ++YH+ S NP ++ ++ F K P+ + P Sbjct: 204 YTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNPCNWHKMGVQVLATFEKIPFERPFRRP 338 The following BLAST results are available for this feature:
BLAST of CX289214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289214 ID=CX289214; Name=CX289214; organism=Citrus clementina; type=EST; length=415bpback to top |