CX289237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 211.075 bits (536), Expect = 1.663e-54 Identity = 97/140 (69.29%), Postives = 116/140 (82.86%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FPAFDQIVNEAAK+RYRSG+ FNCG LT+RAP+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR +VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ + A++ Sbjct: 152 FPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQE 291
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 1.663e-54 Identity = 97/140 (69.29%), Postives = 116/140 (82.86%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FPAFDQIVNEAAK+RYRSG+ FNCG LT+RAP+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR +VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ + A++ Sbjct: 152 FPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQE 291
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.706e-54 Identity = 94/140 (67.14%), Postives = 119/140 (85.00%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FPAFDQIVNEAAK+RYRSG QF+CG LT+R+PYGAVGHGGHYHSQSPE++F H PGLKVVIP +P +AKGLLL+ IR+ +PV+FFEPK +YR +VEEVP DY +PL +A +++EG DIT++GWGAQ+ ++ QA AE+ Sbjct: 132 FPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSPYGAVGHGGHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYRSAVEEVPIGDYEIPLGKARIVKEGKDITIIGWGAQMRVLLQAVNMAEE 271
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 4.840e-54 Identity = 95/140 (67.86%), Postives = 116/140 (82.86%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FPAFDQIVNEAAK+RYRSG+ FNCG LT+R+P+G VGHG YHSQSPEAFF H PG+KVV+PRSP QAKGLLLSCI D NP +FFEPK LYR +VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ + A++ Sbjct: 154 FPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAAMAQE 293
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 1.078e-53 Identity = 96/140 (68.57%), Postives = 115/140 (82.14%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FPAFDQIVNEAAK+RYRSG+ FNCG LT+R+P+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR + EEVP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ + A++ Sbjct: 154 FPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKE 293
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.485e-36 Identity = 77/140 (55.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FP FDQ+V++ AK RYRSG QF L VR P G GGH+HSQSPEA F H GLKVV +P AKGLL + IRD +PVVF EPK LYR EEVPE+DY LP+ +A + REG D+TL+G+G + + QA + K Sbjct: 88 FPGFDQLVSQVAKLRYRSGGQFTAP-LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.950e-35 Identity = 76/140 (54.29%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FP FDQ+V++ AK RYRSG QF L VR P G GGH+HSQSPEA F H GLKVV +P AKGLL + IRD +PVVF EPK LYR EEVPE+DY L + +A + REG D+TL+G+G + + QA + K Sbjct: 88 FPGFDQLVSQVAKLRYRSGGQFTAP-LVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.464e-34 Identity = 74/139 (53.24%), Postives = 96/139 (69.06%), Query Frame = 3 Query: 27 PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 PA +QI++EAAK RYRS N ++C + VRAPYG HG YHSQS EA F + PGLK+V+P +P AKGLL + +RD +PV+FFE K YRL EVP DDY+LP+ +A+V REG DIT++ +G + QA EK Sbjct: 89 PAVNQIISEAAKIRYRSNNDWSCP-IVVRAPYGGGVHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKGEVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 2.264e-27 Identity = 61/144 (42.36%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FG + D I + A+ RYR+G +++ +T+R+P+G H HS S E PGLKVVIP +P AKGLL+S IRD +PV+F E LYR +EVPE +Y +P+ +A++ REG DIT++ +GA + +A + EK Sbjct: 84 FGFVYEVMDSICGQMARIRYRTGGRYHMP-ITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.957e-27 Identity = 58/134 (43.28%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 425 FP + +V AA+ R RS QF + +R P+G +HS++ E F +PGLKVV P +P AKGLLL+ I DP+PVVF EPK +YR +EVP + Y +P+ +A+V+++G+D+T+V WG+ + +E+A Sbjct: 88 FPGYTDLVTHAARMRNRSRGQFTVP-MVLRLPHGGGIRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQEVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKA 220 The following BLAST results are available for this feature:
BLAST of CX289237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289237 ID=CX289237; Name=CX289237; organism=Citrus clementina; type=EST; length=443bpback to top |