CX289249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.730e-60 Identity = 111/132 (84.09%), Postives = 118/132 (89.39%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 RTDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL GK+ID+Y+TQD++EVARDFTYIDD+VKGCVGALDTA AQLRVYNLGNTSPVPVGRLVSILE Sbjct: 255 RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILE 386
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.853e-54 Identity = 101/132 (76.52%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 RTDQPASLYAATKKAGE IAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GKTI V+++ D VARDFTYIDD+VKGC+GALDTA PA R+YNLGNTSPVPV +LV+ILE Sbjct: 239 RTDQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILE 370
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.675e-53 Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 +TDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GK+I ++++ + VARDFTYIDD+VKGC+ ALDTA PAQLRV+NLGNTSPVPV LV ILE Sbjct: 240 KTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILE 371
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 5.960e-53 Identity = 100/132 (75.76%), Postives = 110/132 (83.33%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 RTDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK I +++ + VARDFTYIDD+VKGC+GALDTA AQLRV+NLGNTSPVPV LVSILE Sbjct: 235 RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILE 366
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.734e-52 Identity = 99/132 (75.00%), Postives = 110/132 (83.33%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 RTDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK I +++ + VARDFTYIDD+VKGC+GALDTA AQLRV+NLGNTSPVPV LV+ILE Sbjct: 234 RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILE 365
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 7.540e-48 Identity = 90/132 (68.18%), Postives = 106/132 (80.30%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 RTDQPASLYAATKKAGEEI HTYNHIYGLA+TGLRFFTVYGPWGRPDMAYF FT++ILQGK I +Y+ ++ ++ARDFTYIDD+VKGC+G+LD++ A R++NLGNTSPV V LV ILE Sbjct: 231 RTDQPASLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILE 362
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.759e-31 Identity = 70/136 (51.47%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 9 DQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXP-----AQLRVYNLGNTSPVPVGRLVSILEN 401 D P SLYAATKKA E +AHTY+H+YGL TGLRFFTVYGPWGRPDMA F FTK +L+GK+IDVY + ++ RDFTYIDD+ + + D A RVYN+GN+SPV + + LE+ Sbjct: 145 DHPVSLYAATKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVY---NYGKMKRDFTYIDDIAEAIIRLQDVIPHADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALED 277
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.281e-28 Identity = 67/137 (48.91%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 9 DQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXP------AQLRVYNLGNTSPVPVGRLVSILEN 401 D P SLYAATKK+ E +AHTY+H+Y L TGLRFFTVYGPWGRPDMA F FTK I+ + IDVY + + RDFTY+DD+V+ + L P A +VYN+GN SPV + V +EN Sbjct: 145 DHPLSLYAATKKSNELMAHTYSHLYNLPTTGLRFFTVYGPWGRPDMALFKFTKAIVNDQAIDVY---NHGNMMRDFTYVDDIVE-AISRLVKKPASPNKEWSGADPDPGSSYAPYKVYNIGNNSPVRLMEFVEAIEN 277
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.135e-26 Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 R D+P SLYA+TK++ E +AH Y+H+YG+ + GLRFFTVYG +GRPDMAYF F K+IL GK I+VY + + RDFTYI DVV G + A+ ++NLGN+ PV + + ++E Sbjct: 149 RVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGRPDMAYFKFAKNILLGKEIEVYNYGN---MERDFTYISDVVDGILRAI-------------KKDFDYEIFNLGNSKPVKLMYFIELIE 264
BLAST of CX289249 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.442e-22 Identity = 58/138 (42.03%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 3 RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV------GALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILE 398 R D+P +LYAATKK+ E +AH+Y H+Y + T RFFTVYGPWGRPDMA F F I G+ ID+Y + ++RDFTYIDD+V+ V + + A RV N G PV + V +E Sbjct: 144 RADEPMTLYAATKKSMELMAHSYAHLYKVPTTSFRFFTVYGPWGRPDMALFKFVDAIHNGRPIDIY---GEGRMSRDFTYIDDLVESIVRLSHVPPSEENRVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVE 278 The following BLAST results are available for this feature:
BLAST of CX289249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289249 ID=CX289249; Name=CX289249; organism=Citrus clementina; type=EST; length=401bpback to top |