CX289261

Overview
NameCX289261
Unique NameCX289261
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:1109..1704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.859e-32
Identity = 63/106 (59.43%), Postives = 80/106 (75.47%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK +LHDW+D HCL++LKNCYKS+PE+GKVIV E +LPE P+T+  +++  H+DV+M+  +PGGKERT  EF  LA GAGF G +      N WVMEF K
Sbjct:  249 KGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.563e-30
Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            K DAIFMK + HDW+DEHCLK LKNCY+++P +GKV+V E +LPE P+TS  +K+  H+D++M+  +PGGKERT  EF  LA GAGF G          WVMEF+K
Sbjct:  254 KADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.757e-30
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+DEHCLK LKNCY ++P++GKVI+ E +LP  P++S+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G +   +  N +V+EF K
Sbjct:  258 KGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.323e-29
Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            K DA+FMK + HDW+DEHCLK LKNCY+++P++GKVIV E +LP  P++S+ +K   H+DV+M+  +PGGKERT+ EF  LA GAGF G        N ++MEF K
Sbjct:  258 KADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.728e-29
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+DEHCLK LKNCY ++P++GKVI+ E +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA G+GF GI       N +V+EF K
Sbjct:  258 KGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.728e-29
Identity = 60/106 (56.60%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+DEHCLK LKNCY ++PE GKVIV E +LP  P+ S+ +K   H+D +M+  +PGGKERT  EF  LA GAGF G        N +VMEF K
Sbjct:  263 KGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.728e-29
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+D HCLK LKNC++++PE+GKVI+ E +LPE P++++ +++  H+DV+M+  +PGGKERT  EF  LA GAGF G        N W+ME  K
Sbjct:  258 KGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.948e-29
Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+D+HC KLLKNCY+++P++GKVI+ E +LPE P+TS+ +++  H+DV+M+  +PGGKERT  EF  LA GAGF       +  N W+ME  K
Sbjct:  245 KGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.850e-29
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+DEHC+K LKNCY ++P++GKVI+ E +LPE P+T + +K+  H+DV+M+  +PGGKERT  EF  LA  AGF   +      N W+ME  K
Sbjct:  256 KGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CX289261 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.567e-29
Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 KGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 318
            KGDAIFMK + HDW+DEHCLKLLKNCY ++P +GKVI+ E +LPEVP++S+ +K   H+DV+ +  +PGGKERT  EF  LA  AGF G        N +++EF K
Sbjct:  234 KGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
The following BLAST results are available for this feature:
BLAST of CX289261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_ZINEL4.859e-3259.43Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_CAPAN1.563e-3055.66Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_PRUDU7.757e-3054.72Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_MEDSA1.323e-2953.77Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH1.728e-2955.66Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CLABR1.728e-2956.60Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CATRO1.728e-2952.83Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_COFCA2.948e-2953.77Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_OCIBA3.850e-2952.83Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT2_CHRAE6.567e-2954.72Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC02011A04SK IF1 Citrus clementina cDNA clone C02011A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289261 ID=CX289261; Name=CX289261; organism=Citrus clementina; type=EST; length=596bp
AAAGGTGATGCCATTTTTATGAAGTCGGTACTGCACGATTGGAATGATGA
ACATTGCTTGAAGTTGTTGAAGAATTGCTACAAAAGCATCCCAGAAGATG
GAAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTTCCTAATACAAGC
ATTGAATCAAAATCAAATTCCCATTTGGACGTGCTTATGATGATTCAAAG
TCCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGACCCTGGCTACTG
GCGCTGGTTTTGGTGGGATCAGTTGTGAACTTGCTATTGGTAATCTCTGG
GTTATGGAGTTCTATAAGTAGAGTGCATGCCCATGCATCCTAGAAATAAA
GCAAATCTTGTGTTGATTGTCTTGCGTGTATCTCTTTCCAAGCATGCTGA
TATGTCTCCCAAAGACGAGCAAGAACCCATGCATTTGACAAACTTCCCAG
GTACCTGATAGCCATGCTTGAGAGGAGGAGTCTAGGACTTAATAATAAGT
GCTTTGAAATAAATGGGTGCTTGACACGTGGTCTATCAACTATTTGTGCA
ATATTGTTACCCATATTTCCTATTATTTCTAGTATTTCATGTGTTA
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