CX289273

Overview
NameCX289273
Unique NameCX289273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length573
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:486..1058. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.202e-85
Identity = 155/187 (82.89%), Postives = 170/187 (90.91%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKK-QVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE GYLKK F+G NGPTF T+VSNY PCP P+LIKGLRAHTDAGG+ILLFQDDKVSGLQLLKDGQWIDVPP+RHSIV+NLGDQ+EVITNGKY+SVEHRVI+QTD   RMS+ASFYNPGSDAVIYPAP L+EKEA++K QVYPK VFEDYMKLY  LKFQ KEPRF AMKAVETN++L PIATA
Sbjct:  134 ENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGT-RMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKLYAGLKFQPKEPRFEAMKAVETNISLVPIATA 319          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 2.961e-84
Identity = 150/185 (81.08%), Postives = 166/185 (89.73%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIAT 556
            ENLGLE GYLKK F+G  GP F T+V+NY PCPK DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP++HSIV+NLGDQ+EVITNGKYKSV HRV++QTD   RMS+ASFYNPG+DAVIYPAPAL+EKE ++K+VYPK VF+DYMKLY  LKFQAKEPRF AMKAVE NVNLGPIAT
Sbjct:  134 ENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGT-RMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAKEPRFEAMKAVEANVNLGPIAT 317          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 6.596e-84
Identity = 152/188 (80.85%), Postives = 168/188 (89.36%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEAD--KKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE GYLKK F+G+ GPTF T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG WIDVPP+RH+IVVNLGDQ+EVITNG+YKSV HRV++QT   GRMS+ASFYNPGSDAVIYPAPAL+EK+ D  KK+VYPK VFEDYMKLY+ +KFQAKEPRF AMKA   N NLGP+ATA
Sbjct:  134 ENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAKEPRFEAMKA---NANLGPMATA 318          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 8.615e-84
Identity = 154/186 (82.80%), Postives = 167/186 (89.78%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADK-KQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIAT 556
            ENLGLE GYLK  F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+Q D   RMSLASFYNPGSDAVIYPAPAL+EKEA++ KQVYPK VF+DYMKLY  LKFQAKEPRF AMKA+ET+V + PIAT
Sbjct:  134 ENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD-GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIAT 318          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.125e-83
Identity = 156/188 (82.98%), Postives = 166/188 (88.30%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADK--KQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE GYLKK F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+QTD   RMSLASFYNPGSDAVIYPAP L+EKEAD+  KQVYPK VF+DYMKLY  LKFQAKEPRF AMKA E +V   PIATA
Sbjct:  134 ENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGT-RMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAREADVKSDPIATA 320          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 1.469e-83
Identity = 150/190 (78.95%), Postives = 171/190 (90.00%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEA--DKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNV--NLGPIATA 559
            ENLGLE GYLKKVF+G+  PTF T+VSNY PCP PDL+KGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP++HSIVVNLGDQ+EVITNGKYKSVEHRV+SQTD EGRMS+ASFYNPGSD+VI+PAP L+ KEA  +KK+ YP+ VFEDYMKLY  +KFQAKEPRF AMKA+ET V  N+GP+ATA
Sbjct:  134 ENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAKEPRFEAMKAMETTVANNVGPLATA 323          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 2.771e-82
Identity = 148/186 (79.57%), Postives = 168/186 (90.32%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEAD-KKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIAT 556
            EN+GLE GYLKK F+G+ GPTF T+VSNY PCP+P+LIKGLRAHTDAGGIILLFQD+KVSGLQLLKDG+WIDVPP++HSIV+N+GDQ+EVITNGKYKSV HRVI+Q D   RMS+ASFYNPGSDAV+YPAPAL++KE D +KQVYPK VFEDYMKLY  LKFQAKEPRF AMKA+E  VNLGPIAT
Sbjct:  134 ENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPD-GNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMENAVNLGPIAT 318          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 6.174e-82
Identity = 148/186 (79.57%), Postives = 166/186 (89.25%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADK-KQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIAT 556
            ENLGLE GYLKK F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNGKYKSV HRVI+QTD   RMSLASFYNP SDAVIYPAPAL+E++A++ KQ+YPK VF+DYMKLY  LKFQAKEPRF AMKA+E +V + P+AT
Sbjct:  134 ENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGT-RMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAKEPRFEAMKAMEADVKIDPVAT 318          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 4.002e-81
Identity = 145/186 (77.96%), Postives = 167/186 (89.78%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVE-TNVNLGPIAT 556
            ENLGLE GYLKKVF+G+ GP F T+VSNY PCPKP+LIKGLRAHTDAGG+ILLFQDDKVSGL +LKDG+W+DVPP+ HSIV+NLGDQ+EVITNGKYKSV HRVI+Q D   RMS+ASFYNPG+DAVIYPAPAL+E E +K ++YPK VF+DYMKLYV LKFQAKEPRF AMKA+E TN+N+GPIAT
Sbjct:  135 ENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQED-GNRMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAKEPRFEAMKAMESTNLNMGPIAT 319          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 8.915e-81
Identity = 148/186 (79.57%), Postives = 161/186 (86.56%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE  YLK  F+GANGPTF T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG W+DVPP++HSIVVNLGDQ+EVITNGKYKSV HRVI+QTD   RMS+ASFYNPGSDAVIYPAP L+EKE +K + YPK VFEDYM LY+ LKFQ KEPRF AMKA+ET    GPI TA
Sbjct:  140 ENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTD-GNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEKEPRFEAMKAMETT---GPIPTA 321          
The following BLAST results are available for this feature:
BLAST of CX289273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
ACCO_PRUMU1.202e-8582.891-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_DIOKA2.961e-8481.081-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_CUCME6.596e-8480.851-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_PETHY8.615e-8482.801-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO3_PETHY1.125e-8382.981-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_ARATH1.469e-8378.951-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_ACTDE2.771e-8279.571-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO4_PETHY6.174e-8279.571-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_CUCME4.002e-8177.961-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_DIACA8.915e-8179.57Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]

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Properties
Property NameValue
Genbank descriptionC02011B04SK IF1 Citrus clementina cDNA clone C02011B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289273 ID=CX289273; Name=CX289273; organism=Citrus clementina; type=EST; length=573bp
CGAGAATCTTGGATTAGAGAACGGGTACTTGAAAAAGGTCTTTCATGGGG
CAAACGGGCCAACCTTTGTTACCGAAGTTAGCAACTACGCACCATGCCCT
AAGCCAGATTTGATCAAGGGTCTCCGGGCTCACACCGACGCCGGCGGCAT
CATCTTGCTCTTCCAGGATGACAAAGTCAGCGGCCTTCAGCTTCTTAAAG
ATGGCCAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAAC
CTCGGTGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGA
GCACAGAGTGATTTCTCAAACCGACCGCGAGGGCCGGATGTCCCTAGCTT
CATTCTACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTG
CTTGAAAAAGAAGCTGACAAGAAACAAGTGTACCCAAAACTTGTTTTTGA
GGACTACATGAAGCTCTATGTTCCCCTCAAGTTCCAGGCCAAGGAACCAA
GATTTGCAGCCATGAAAGCTGTGGAAACTAATGTTAACTTGGGTCCAATT
GCCACCGCTTAAACTATTATTTT
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