CX289298

Overview
NameCX289298
Unique NameCX289298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:679..1194. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 7.395e-91
Identity = 162/171 (94.74%), Postives = 169/171 (98.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 2.379e-89
Identity = 161/171 (94.15%), Postives = 167/171 (97.66%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK D  KY KMKERLVGVSEETTTGVKRLYQMQE+GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG+Q+LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LKTDASKYRKMKERLVGVSEETTTGVKRLYQMQESGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGIQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 2.379e-89
Identity = 161/171 (94.15%), Postives = 167/171 (97.66%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+S+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEI
Sbjct:  185 LKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 2.379e-89
Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALMEGLQVLTLEDV+S+ADIF TTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 2.630e-88
Identity = 161/171 (94.15%), Postives = 166/171 (97.08%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK+DP KY +MKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LKSDPTKYTRMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 4.486e-88
Identity = 161/171 (94.15%), Postives = 164/171 (95.91%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+SD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 4.486e-88
Identity = 161/171 (94.15%), Postives = 164/171 (95.91%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+SD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 5.859e-88
Identity = 158/171 (92.40%), Postives = 163/171 (95.32%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK DPK+YHKMK RLVGVSEETTTGVKRLYQMQ  GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKV VVCGYGDVGKGCA ALK AGARVIVTEIDPICALQALMEG Q+LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LKVDPKRYHKMKTRLVGVSEETTTGVKRLYQMQATGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVGVVCGYGDVGKGCALALKAAGARVIVTEIDPICALQALMEGFQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.705e-87
Identity = 159/171 (92.98%), Postives = 164/171 (95.91%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            LK DPK+Y KMK R+VGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQ GARVIVTEIDPICALQALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMV  MKKMKNNAIVCNIGHFDNEI
Sbjct:  185 LKTDPKRYQKMKTRIVGVSEETTTGVKRLYQMQASGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQGGARVIVTEIDPICALQALMEGLQVLTLEDVISEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEI 355
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 1.443e-86
Identity = 158/171 (92.40%), Postives = 163/171 (95.32%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L  DPKKY +MKERLVGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG GCAAALK AGARVIVTEIDPICALQALMEGL VL LEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEI
Sbjct:  185 LSVDPKKYRRMKERLVGVSEETTTGVKRLYQMQYSGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGLGCAAALKTAGARVIVTEIDPICALQALMEGLPVLRLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEI 355
The following BLAST results are available for this feature:
BLAST of CX289298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH1_ARATH7.395e-9194.74Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_WHEAT2.379e-8994.15Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_LUPLU2.379e-8994.15Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH2_ARATH2.379e-8993.57Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_CATRO2.630e-8894.15Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_TOBAC4.486e-8894.15Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY4.486e-8894.15Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_MESCR5.859e-8892.40Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_MEDSA1.705e-8792.98Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_PHASS1.443e-8692.40Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]

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Properties
Property NameValue
Genbank descriptionC02011D10SK IF1 Citrus clementina cDNA clone C02011D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289298 ID=CX289298; Name=CX289298; organism=Citrus clementina; type=EST; length=516bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGTGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGATGTCCTCTCCGA
TGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATGGTTG
ACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCAC
TTTGATAATGAAATTG
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