CX289311

Overview
NameCX289311
Unique NameCX289311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length430
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: FAHD1_DICDI (Fumarylacetoacetate hydrolase domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=fahd1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 7.207e-44
Identity = 86/144 (59.72%), Postives = 109/144 (75.69%), Query Frame = 1
Query:    1 KPTSSYLGNG-GTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KPTSSYL  G G IE+P     +HHEVEL +VIG+K RD+   +AMDYV GY +ALDMT+R+ QS AK+  LPWTV+KG DTF PIS  +PK  + D +N+ELW +VDG+I+QKG+T  MIF +P+LI +ISSIMTL  GD+IL
Sbjct:   38 KPTSSYLLQGTGPIEIPLESSDIHHEVELGIVIGKKGRDIDLKSAMDYVSGYTLALDMTSRDQQSIAKAKSLPWTVSKGYDTFCPISGFIPKDKIKDLNNVELWCSVDGQIKQKGNTNQMIFDVPHLIQYISSIMTLESGDLIL 181          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: FAHD1_BOVIN (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Bos taurus GN=FAHD1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.739e-43
Identity = 80/143 (55.94%), Postives = 105/143 (73.43%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KP+++Y   G  + VP    +LHHE+ELAVV+G++ R V E  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPHNL+LWL V+GE+RQ+G T  MIF IPY+IS++S IMTL EGD+IL
Sbjct:   44 KPSTAYAPEGSPVLVPAYTRNLHHELELAVVMGKRCRAVSEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHNLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIMTLEEGDIIL 186          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: FAHD1_PONAB (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Pongo abelii GN=FAHD1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.672e-43
Identity = 79/143 (55.24%), Postives = 105/143 (73.43%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KP+++Y   G  I +P    +LHHE+EL VV+G++ R VPE  AMDYVGGYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPH L+LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+IL
Sbjct:   47 KPSTAYAPEGSPILMPAYTRNLHHELELGVVMGRRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIIL 189          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: FAHD1_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Homo sapiens GN=FAHD1 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 4.672e-43
Identity = 79/143 (55.24%), Postives = 105/143 (73.43%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KP+++Y   G  I +P    +LHHE+EL VV+G++ R VPE  AMDYVGGYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPH L+LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+IL
Sbjct:   47 KPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIIL 189          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: FAHD1_RAT (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Rattus norvegicus GN=Fahd1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.563e-41
Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KP+++Y   G  + +P    +LHHEVEL V++G++   VPE  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK   +  P+S+ +PK  +PDPH L LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+IL
Sbjct:   44 KPSTAYAPEGSPVLMPAYCRNLHHEVELGVLLGRRGEAVPEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLIL 186          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: FAHD1_MOUSE (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Mus musculus GN=Fahd1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.348e-41
Identity = 75/143 (52.45%), Postives = 103/143 (72.03%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KP+++Y   G  + +P    +LHHEVEL V++G++   +PE  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK   +  P+S+ +PK  +PDPH L LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+IL
Sbjct:   50 KPSTAYAPEGSPVLMPAYCRNLHHEVELGVLLGKRGEAIPEAAAMDYVAGYALCLDMTARDVQEECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLIL 192          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: Y643_PYRHO (Uncharacterized protein PH0643 OS=Pyrococcus horikoshii GN=PH0643 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.761e-34
Identity = 70/142 (49.30%), Postives = 98/142 (69.01%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426
            KP S+ +G G +I +P     + HEVELAV++G++A++VP + A DY+ GY + LD+TAR++Q+ A+  G PWT++KG DTF PI   +  S   DP +LE+ L V+G+IRQ G T  MIF IP LI +IS IMTL  GD+I
Sbjct:   50 KPPSALIGPGSSIILPRRSKRVDHEVELAVIMGKRAKNVPASKAFDYILGYTIILDITARDLQAEARKKGYPWTISKGFDTFAPIGPRVVDSRELDPSDLEIGLKVNGKIRQLGRTSQMIFKIPELIEYISHIMTLEPGDII 191          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: Y1397_PYRAB (Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi GN=PYRAB13970 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.831e-34
Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426
            KP S+ +G    I +P     + HEVELAV+IG++A++VP   A DY+ GY + LD+TAR++Q+ A+  G PWTV+KG DTF PI   +      DP +LE+ L V+G++RQ G T +MIF IP LI +ISSIMTL  GD+I
Sbjct:   45 KPPSALIGPNSVIVLPRRSKRVDHEVELAVIIGKRAKNVPAEKAFDYILGYTILLDITARDLQAEARKKGYPWTVSKGFDTFAPIGPRIVDKRELDPSDLEIGLKVNGKVRQLGRTSEMIFKIPELIEYISSIMTLEPGDII 186          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: YO23_CAEEL (Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans GN=ZK688.3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.659e-30
Identity = 66/143 (46.15%), Postives = 91/143 (63.64%), Query Frame = 1
Query:    1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            K  +S++  G  I  P    +LH EVEL VVI +KA  + ++ AMDY+GGY VALDMTAR+ Q  AK AG PW +AK  D   PI   LP S +P+PH++EL+  ++G+ +Q+  T  MIF IP L+ + +   TL  GDV+L
Sbjct:   41 KTVNSFIVEGEPIVAPPGCQNLHQEVELGVVISKKASRISKSDAMDYIGGYTVALDMTARDFQDEAKKAGAPWFLAKSFDGSCPIGGFLPVSDIPNPHDVELFCKINGKDQQRCRTDVMIFDIPTLLEYTTQFFTLEVGDVVL 183          
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: YOS9_SCHPO (Uncharacterized hydrolase C21C3.09c OS=Schizosaccharomyces pombe GN=SPBC21C3.09c PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.613e-27
Identity = 64/147 (43.54%), Postives = 95/147 (64.63%), Query Frame = 1
Query:    1 KPTSSYLGNG-GTIEVPHPLDSLHHEVELAVVIGQKA---RDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429
            KPTS+ +  G G + +P P  S H+EVEL +++  +    R V   + +D +G Y V +DMTAR IQ+ AK  GLPW+ AKG DTF P+  ++PK  +PDPHN+ L L+++G++ QK ST  M+  IP + S I+  M+L  GD++L
Sbjct:   35 KPTSAIVEPGHGNLIIP-PDVSAHYEVELGLIMKDRLPARRPVSSNSWLDSIGAYFVGIDMTARNIQNEAKKKGLPWSFAKGYDTFLPVGPIIPKHLIPDPHNVILELSLNGKVVQKDSTSLMLNKIPKIFSSITEAMSLNPGDLVL 180          
The following BLAST results are available for this feature:
BLAST of CX289311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
FAHD1_DICDI7.207e-4459.72Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_BOVIN2.739e-4355.94Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_PONAB4.672e-4355.24Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_HUMAN4.672e-4355.24Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_RAT2.563e-4153.15Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_MOUSE3.348e-4152.45Fumarylacetoacetate hydrolase domain-containing pr... [more]
Y643_PYRHO6.761e-3449.30Uncharacterized protein PH0643 OS=Pyrococcus horik... [more]
Y1397_PYRAB8.831e-3449.30Uncharacterized protein PYRAB13970 OS=Pyrococcus a... [more]
YO23_CAEEL2.659e-3046.15Uncharacterized protein ZK688.3 OS=Caenorhabditis ... [more]
YOS9_SCHPO1.613e-2743.54Uncharacterized hydrolase C21C3.09c OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionC02011E11SK IF1 Citrus clementina cDNA clone C02011E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289311 ID=CX289311; Name=CX289311; organism=Citrus clementina; type=EST; length=430bp
AAACCGACGTCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTACCTCA
TCCCCTGGATTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATCGGAC
AGAAAGCTCGAGATGTGCCTGAAACCACTGCCATGGACTATGTTGGAGGC
TATGCAGTGGCGCTTGATATGACTGCAAGGGAAATCCAATCTTCTGCCAA
GTCTGCAGGTCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTCACAC
CAATTAGCTCTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAACTTG
GAACTATGGTTAACGGTTGATGGAGAGATTCGACAGAAAGGCTCCACTAA
GGATATGATTTTTATGATACCATATCTAATTAGCCACATAAGTTCAATTA
TGACACTTTTTGAAGGAGATGTCATATTAA
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