CX289353

Overview
NameCX289353
Unique NameCX289353
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length370
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_PNECA (Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.654e-19
Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTML---TPKDLSFVGYTYKNFEAVKDK 363
            ++W+ +L FPE+  L+ EA+DLI +LL   + RLG  G+  IK HP+F+ + WD + E+ A + P++  + DT  F + D + + T     S P+ +  +     ++L+FVGYTYK F+ +  K
Sbjct:  384 INWRENLYFPEDLHLSAEAEDLIRKLLTSADQRLGRYGANDIKLHPFFRGVNWDTIREINAPFIPQLKSITDTSYFEEIDTIPNIT---MNSPPVLQNKIPSDVDQNLAFVGYTYKRFDMMTQK 504          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18
Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFEAVKDKRS 369
            ++WK  L FP E  ++ +AKDLI R   D E+R+G  G E+IK HP+F+ + W+ + E  AA   E+  + DT NF  F E +   P    + P  K+    KD  F+ YTYK FE +  + S
Sbjct:  336 MNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEIKGHPFFEGVDWEHIRERPAAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKS----KDWVFLNYTYKRFEGLTQRGS 454          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: NDRB_DICDI (Probable serine/threonine-protein kinase ndrB OS=Dictyostelium discoideum GN=ndrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.067e-17
Identity = 48/125 (38.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query:    1 VHWKNHL-KFPEEAR----LTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFEAVKD 360
            ++WK  L K  EEA+    L+PEA+DLI R L D   R+G  G E+I++HP+FK + W +L E      P+++   DT NF  ++E +   P +      R+  +T  D+ F+GYTY+NF+A++D
Sbjct:  385 MNWKQTLPKIMEEAKAEVNLSPEAQDLIERFLTDPMTRIGFNGVEEIQSHPFFKGVDWRRLRETRPPIIPQLSSPTDTSNFDHYEEEQQPEPMQPVQSKSRR-KITSFDIPFIGYTYRNFDAMRD 508          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: STK38_PONAB (Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.394e-17
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPK-RTGSGPMRKTMLTPKDLSFVGYTYKNFEAV 354
            ++WK  L FP E  ++ +AKDLI R  C+ EHR+G  G E+IK++ +F+ + W+ + E  AA   E+  + DT NF +F E +   P   T + P  +T    KD  F+ YTYK FE +
Sbjct:  335 MNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHP--ETDYKNKDWVFINYTYKRFEGL 451          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: STK38_HUMAN (Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.394e-17
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPK-RTGSGPMRKTMLTPKDLSFVGYTYKNFEAV 354
            ++WK  L FP E  ++ +AKDLI R  C+ EHR+G  G E+IK++ +F+ + W+ + E  AA   E+  + DT NF +F E +   P   T + P  +T    KD  F+ YTYK FE +
Sbjct:  335 MNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHP--ETDYKNKDWVFINYTYKRFEGL 451          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.056e-17
Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 1
Query:    7 WKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFEAVKDKRS 369
            WK  L FP E  ++ +AKDLI R   D E+R+G  G E+IK HP+F+ + W  + E  AA   E+  + DT NF  F E +   P    + P  K+    KD  F+ YTYK FE +  + S
Sbjct:  338 WKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKS----KDWVFLNYTYKRFEGLTQRGS 454          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: STK38_BOVIN (Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.297e-17
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPK-RTGSGPMRKTMLTPKDLSFVGYTYKNFEAV 354
            ++WK  L FP E  ++ +AKDLI R  C+ EHR+G  G E+IK + +F+ + W+ + E  AA   E+  + DT NF +F E +   P   T + P   T    KD  F+ YTYK FE +
Sbjct:  335 MNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKNNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHP--DTDYKNKDWVFINYTYKRFEGL 451          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: STK38_MOUSE (Serine/threonine-protein kinase 38 OS=Mus musculus GN=Stk38 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFEAV 354
            ++WK  L FP E  ++ +AK LI R  C+ EHR+G  G E+IK + +F+ + W+ + E  AA   E+  + DT NF +F E +   P  T S    +T    KD  F+ YTYK FE +
Sbjct:  335 MNWKETLTFPPEVPVSEKAKGLILRFCCEWEHRIGAPGVEEIKNNLFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVTTSS-HPETDYKNKDWVFINYTYKRFEGL 451          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_DEBHA (Serine/threonine-protein kinase CBK1 OS=Debaryomyces hansenii GN=CBK1 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.434e-16
Identity = 42/131 (32.06%), Postives = 82/131 (62.60%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL-GSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVES--QTPKRTGSGPMRKTML-----TPKDLSFVGYTYKNFEAVKDKRS 369
            ++W+  L+ P++  L+PE++DLI +LL + E+RLG   G++++K+HP+F+ + WD + +++A + P++  + DT+ F   DE+E+   +P  + +   R  +L       +DL F+GYTY  F+ +  K +
Sbjct:  586 LNWQETLQIPDDIHLSPESEDLIRKLLTNAENRLGRYNGADELKSHPFFRGVDWDTIRKVDAPFIPKLRSITDTR-FFPTDELENVPDSPALSKAMEQRDQVLQNGGNVKEDLPFIGYTYSRFDYLTRKNA 715          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ORB6_SCHPO (Serine/threonine-protein kinase orb6 OS=Schizosaccharomyces pombe GN=orb6 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.857e-16
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVES--QTPKRTGSGPMRKTMLTPKDLSFVGYTYKNF 345
            ++W+  L FP +  L+ EA+DL+ RL+ D EHRLG  G+ +I  HP+F  I WD + E  A + P +  + DT ++   DE+E   + P       +    L   +L+F+GYTYK F
Sbjct:  345 INWRETLTFPNDIHLSIEARDLMDRLMTDSEHRLGRGGAIEIMQHPFFTGIDWDHIRETAAPFIPNLKSITDT-HYFPVDELEQVPEQPVTQQPASVDPQTLEQTNLAFLGYTYKKF 460          
The following BLAST results are available for this feature:
BLAST of CX289353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
CBK1_PNECA9.654e-1935.48Serine/threonine-protein kinase CBK1 OS=Pneumocyst... [more]
ST38L_HUMAN6.257e-1838.21Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
NDRB_DICDI1.067e-1738.40Probable serine/threonine-protein kinase ndrB OS=D... [more]
STK38_PONAB1.394e-1738.66Serine/threonine-protein kinase 38 OS=Pongo abelii... [more]
STK38_HUMAN1.394e-1738.66Serine/threonine-protein kinase 38 OS=Homo sapiens... [more]
ST38L_MOUSE4.056e-1738.84Serine/threonine-protein kinase 38-like OS=Mus mus... [more]
STK38_BOVIN5.297e-1738.66Serine/threonine-protein kinase 38 OS=Bos taurus G... [more]
STK38_MOUSE2.013e-1638.14Serine/threonine-protein kinase 38 OS=Mus musculus... [more]
CBK1_DEBHA3.434e-1632.06Serine/threonine-protein kinase CBK1 OS=Debaryomyc... [more]
ORB6_SCHPO5.857e-1636.75Serine/threonine-protein kinase orb6 OS=Schizosacc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02012A08SK IF1 Citrus clementina cDNA clone C02012A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289353 ID=CX289353; Name=CX289353; organism=Citrus clementina; type=EST; length=370bp
GTGCATTGGAAAAATCACTTGAAGTTTCCGGAGGAGGCAAGATTGACGCC
TGAAGCAAAGGATCTTATTTGTAGGTTGCTTTGTGATGTTGAGCATAGGC
TTGGAACTCTTGGGTCTGAGCAAATTAAAGCTCATCCTTGGTTCAAAGAT
ATTGCATGGGACAAACTCTATGAAATGGAAGCAGCATATAAACCAGAGGT
CAATGGTGTACTCGATACCCAAAACTTCATGAAATTTGATGAGGTGGAGT
CCCAAACACCAAAAAGAACAGGATCTGGACCCATGAGGAAGACGATGTTA
ACTCCTAAAGATCTCAGTTTTGTTGGGTACACATATAAGAATTTTGAGGC
TGTCAAAGATAAAAGGAGTA
back to top