CX290060

Overview
NameCX290060
Unique NameCX290060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12834 contig Ccv1_Contig12834:377..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290060 vs. ExPASy Swiss-Prot
Match: PEAM1_ARATH (Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.874e-108
Identity = 182/217 (83.87%), Postives = 203/217 (93.55%), Query Frame = 1
Query:   31 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGG 681
            PYEGK+VLE GAGIGRFTGELA+KAG +IALDFID+VIKKNE +NGH++NVKFMCADVTSPDL  ++ S+D++FSNWLLMYLSDKEVE LAERMV W+KVGGYIFFRESCFHQSGDSKRK NPTHYREPRFYSKVF+ECQ +DA+GNSFELS++G KCIGAYVKNKKNQNQICWIWQKV S+NDRGFQ+FLDNVQYK +GILRYERVFG GFVSTGG
Sbjct:   51 PYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESINGHYKNVKFMCADVTSPDLKITDGSLDLIFSNWLLMYLSDKEVELLAERMVGWIKVGGYIFFRESCFHQSGDSKRKSNPTHYREPRFYSKVFQECQTRDAAGNSFELSMIGCKCIGAYVKNKKNQNQICWIWQKVSSENDRGFQRFLDNVQYKSSGILRYERVFGQGFVSTGG 267          
BLAST of CX290060 vs. ExPASy Swiss-Prot
Match: PEAM2_ARATH (Putative phosphoethanolamine N-methyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.257e-104
Identity = 175/217 (80.65%), Postives = 198/217 (91.24%), Query Frame = 1
Query:   31 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGG 681
            PYEGK+VLE GAGIGRFTGELA+KAG VIALDFI+S I+KNE VNGH++N+KFMCADVTSPDL   + S+D++FSNWLLMYLSDKEVE +AERM+ W+K GGYIFFRESCFHQSGDSKRK NPTHYREPRFY+KVF+ECQ +DASGNSFELS+VG KCIGAYVKNKKNQNQICWIWQKV  +ND+ FQ+FLDNVQYK +GILRYERVFG G+VSTGG
Sbjct:   35 PYEGKSVLELGAGIGRFTGELAQKAGEVIALDFIESAIQKNESVNGHYKNIKFMCADVTSPDLKIKDGSIDLIFSNWLLMYLSDKEVELMAERMIGWVKPGGYIFFRESCFHQSGDSKRKSNPTHYREPRFYTKVFQECQTRDASGNSFELSMVGCKCIGAYVKNKKNQNQICWIWQKVSVENDKDFQRFLDNVQYKSSGILRYERVFGEGYVSTGG 251          
BLAST of CX290060 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 5.838e-102
Identity = 171/217 (78.80%), Postives = 196/217 (90.32%), Query Frame = 1
Query:   31 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGG 681
            PYEGK+VLE GAGIGRFTGELA+KA  VIALDFI+SVIKKNE +NGH++NVKFMCADVTSP L  S +SVD++FSNWLLMYLSD+EVE+L ERM+KWLK GGYIFFRESCFHQSGD KRK NPTHYREPRFY+K+FKEC +QD SGNS+ELSL+G KCIGAYVK+KKNQNQI W+WQKV S++D+GFQ+FLD+ QYK N ILRYERVFG G+VSTGG
Sbjct:   54 PYEGKSVLELGAGIGRFTGELAEKASQVIALDFIESVIKKNESINGHYKNVKFMCADVTSPSLNISPNSVDIIFSNWLLMYLSDEEVERLVERMLKWLKPGGYIFFRESCFHQSGDHKRKSNPTHYREPRFYTKIFKECHMQDDSGNSYELSLIGCKCIGAYVKSKKNQNQISWLWQKVDSEDDKGFQRFLDSSQYKFNSILRYERVFGPGYVSTGG 270          
BLAST of CX290060 vs. ExPASy Swiss-Prot
Match: PEAM3_ARATH (Putative phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 9.958e-102
Identity = 168/217 (77.42%), Postives = 197/217 (90.78%), Query Frame = 1
Query:   31 PYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNWLLMYLSDKEVEKLAERMVKWLKVGGYIFFRESCFHQSGDSKRKHNPTHYREPRFYSKVFKECQIQDASGNSFELSLVGYKCIGAYVKNKKNQNQICWIWQKVRSQNDRGFQQFLDNVQYKLNGILRYERVFGVGFVSTGG 681
            P EG TVLEFGAGIGRFT ELA+KAG VIA+DFI+SVIKKNE +NGH++NVKF+CADVTSP++ F  +S+D++FSNWLLMYLSD+EVE LA++M++W KVGGYIFFRESCFHQSGD+KRK+NPTHYREP+FY+K+FKEC + D  GNS+ELSLV  KCIGAYV+NKKNQNQICW+WQKV S NDRGFQ+FLDNVQYK +GILRYERVFG GFVSTGG
Sbjct:   50 PIEGTTVLEFGAGIGRFTTELAQKAGQVIAVDFIESVIKKNENINGHYKNVKFLCADVTSPNMNFPNESMDLIFSNWLLMYLSDQEVEDLAKKMLQWTKVGGYIFFRESCFHQSGDNKRKYNPTHYREPKFYTKLFKECHMNDEDGNSYELSLVSCKCIGAYVRNKKNQNQICWLWQKVSSDNDRGFQRFLDNVQYKSSGILRYERVFGEGFVSTGG 266          
The following BLAST results are available for this feature:
BLAST of CX290060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PEAM1_ARATH1.874e-10883.87Phosphoethanolamine N-methyltransferase 1 OS=Arabi... [more]
PEAM2_ARATH1.257e-10480.65Putative phosphoethanolamine N-methyltransferase 2... [more]
PEAMT_SPIOL5.838e-10278.80Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
PEAM3_ARATH9.958e-10277.42Putative phosphoethanolamine N-methyltransferase 3... [more]
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Properties
Property NameValue
Genbank descriptionC02020A11SK IF1 Citrus clementina cDNA clone C02020A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290060 ID=CX290060; Name=CX290060; organism=Citrus clementina; type=EST; length=685bp
GAATTCGGCACTAGGGCTTTCTCTACTTCCCCATATGAAGGAAAAACAGT
TCTGGAATTTGGAGCTGGAATCGGTAGATTTACCGGTGAATTAGCTAAGA
AGGCTGGTCATGTTATAGCCCTGGACTTTATTGACAGTGTCATCAAGAAG
AATGAAGAAGTGAATGGGCATTTTGAGAATGTCAAATTCATGTGTGCAGA
TGTTACATCCCCAGACCTTACTTTCTCTGAGGATTCAGTGGACATGATGT
TCTCAAATTGGCTGCTGATGTATCTTTCAGACAAAGAGGTGGAAAAATTG
GCAGAAAGGATGGTTAAATGGTTAAAGGTCGGTGGGTACATCTTCTTCAG
GGAGTCATGTTTTCATCAATCTGGAGACAGCAAGCGAAAACACAACCCGA
CCCACTACCGTGAACCCAGATTTTATTCAAAGGTCTTTAAAGAATGCCAG
ATACAAGATGCTTCAGGAAATTCCTTTGAGCTATCACTGGTTGGTTACAA
GTGCATAGGAGCATATGTGAAAAACAAAAAGAACCAAAATCAGATTTGCT
GGATCTGGCAAAAGGTCCGTTCTCAAAATGATAGGGGGTTCCAACAGTTC
CTGGATAATGTTCAGTATAAACTTAATGGCATTTTACGTTACGAGCGTGT
CTTTGGAGTAGGTTTTGTGAGCACAGGAGGAAATT
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