CX290069

Overview
NameCX290069
Unique NameCX290069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9479 contig Ccv1_Contig9479:204..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.411e-44
Identity = 105/219 (47.95%), Postives = 127/219 (57.99%), Query Frame = 3
Query:   21 GEDKSTSVNVGKGGVNVDA----GKXXXXXXXXXXXXXXXXXXXXXXXDKRXXXXXXXXXXXXXXXXXXXPVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEV-KKGTKMQTYTIAA 659
            G+   TSV VGKGGV V+     GK                                             PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P  +GE+K CATSLESM+DF+TS LG S V+A ST V K+G+  Q YT+ A
Sbjct:  115 GKPGGTSVGVGKGGVGVNVQPGYGKPGGTTVGVGKGGVGVNVQPGYGKPGGTTVGVGKGGVGVNVKPRGKPVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTA 333          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.907e-41
Identity = 109/228 (47.81%), Postives = 129/228 (56.58%), Query Frame = 3
Query:   36 TSVNVGKGGVNVDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSN--GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTI-AAGVKQM 674
            T+VNVGKGGV VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE   + GE+KYCATSLESM+DFS SKLGK  V+A+STEV KK   MQ Y I AAGVK++
Sbjct:   78 TAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKL 305          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27
Identity = 66/129 (51.16%), Postives = 84/129 (65.12%), Query Frame = 3
Query:  282 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG--TKMQTYTIAA 659
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE     GE K CATSLESM++F+ S LG + V A+STEV +   T  Q Y + A
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEA 149          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 70/155 (45.16%), Postives = 92/155 (59.35%), Query Frame = 3
Query:  222 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV--KKG-TKMQTYTIAAGVKQM 674
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P  KGE+K CATSLESM+DF  S LG + ++A ST +  K G T  Q YT+  G ++M
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTV-TGARRM 235          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.622e-24
Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 3
Query:  273 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAIST-----EVKKGTKMQTYTIAAGVKQM 674
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P  KGE+K CATSLES++DF TS  G S V A ST      V+  +  Q YT+ +GV++M
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTV-SGVRRM 495          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 65/143 (45.45%), Postives = 87/143 (60.84%), Query Frame = 3
Query:  258 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE-----QKYCATSLESMIDFSTSKLG-KSVQAISTEVKK---GTKMQTYTIAA 659
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE   I  E     + YCATSLESM++   S LG + V A+STEV      T  Q Y + A
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEA 194          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 67/150 (44.67%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  234 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE----QKYCATSLESMIDFSTSKLG-KSVQAISTEV---KKGTKMQTYTIAA 659
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE   + GE    + YCATSLESM++F  S LG + V A+STEV      T  Q Y + A
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRVEA 191          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.994e-23
Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  258 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP--GIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV----KKGTKMQTYTIAA 659
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE    G + + K+C TSLESM++F+ + LG + ++A+STEV       T  Q YT+ A
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEA 223          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  294 TALFFLEKDLHPGMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAA 659
            T +FF E+ +  G ++  HF   +  A  FL RQ A S PF++  LP I   F +   S     M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ A
Sbjct:  139 TTVFFHEEAVRVGRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVA 263          
BLAST of CX290069 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 44/125 (35.20%), Postives = 74/125 (59.20%), Query Frame = 3
Query:  294 TALFFLEKDLHPGMKMNLHF-TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAA 659
            T +FF E+ +  G ++  +F   T++   FL R+ A S PF++  LP +   F V P + EA  M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST  + G  +Q Y + A
Sbjct:  187 TTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA 311          
The following BLAST results are available for this feature:
BLAST of CX290069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
BURP3_ORYSJ1.411e-4447.95BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH1.907e-4147.81Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP6_ORYSJ4.559e-2751.16BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP5_ORYSJ3.267e-2545.16BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ1.622e-2447.92BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP2_ORYSJ6.162e-2445.45BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ6.162e-2444.67BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ3.994e-2345.77BURP domain-containing protein 8 OS=Oryza sativa s... [more]
RAF1B_WHEAT1.376e-1536.80Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURPD_ORYSJ1.521e-1435.20BURP domain-containing protein 13 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC02020B08SK IF1 Citrus clementina cDNA clone C02020B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290069 ID=CX290069; Name=CX290069; organism=Citrus clementina; type=EST; length=674bp
CTCGTGCCGATTCGGCACGAGGGGAAGACAAAAGCACCTCTGTCAACGTA
GGGAAGGGTGGTGTCAATGTGGATGCAGGGAAAGGAAAGCCCGGTGGTGG
CACCCATGTGAATGTTGGGGGTAAGGGCGTTGGTGTAAACACTGGAAAGC
CTGACAAAAGAACCAGTGTTGGTGTTGGCAAAGGAGGAGTATCCGTAAGT
ACAGGACACAAGGGAAAGCCAGTTTATGTTGGAGTAAGCCCATTCAACTA
TGTATATGCTGCAAATGAGAACCAACTCCATGATGACCCGAATACAGCTC
TTTTCTTCTTGGAAAAGGACTTGCATCCTGGGATGAAGATGAACTTGCAC
TTCACTCAAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGCCAA
ATCAACTCCTTTCTCGTCTGACAAATTGCCTGAGATCTTTAACCAGTTTT
CCGTGAAACCTGGATCAGTTGAAGCTGAAATAATGCAGAACACAATCAAA
GAGTGTGAAGACCCTGGCATTAAAGGAGAGCAGAAATATTGTGCAACTTC
ATTGGAGTCAATGATTGACTTCAGCACTTCTAAGCTTGGAAAGAGTGTTC
AGGCAATTTCTACGGAGGTAAAAAAAGGAACCAAGATGCAGACATATACA
ATCGCAGCTGGAGTGAAGCAGATG
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