CX290072

Overview
NameCX290072
Unique NameCX290072
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig257 contig Ccv1_Contig257:1..680. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MA2B1_HUMAN (Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 6.461e-37
Identity = 96/220 (43.64%), Postives = 127/220 (57.73%), Query Frame = 2
Query:   17 GKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTG-QEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLQELDDGSVLLRLAHLYEEGEDAEYSTLAKVEL 670
            GKEVISR    + T+  FYTDSNGR+ L+R RDYR  W L   EPVAGNYYP+N  I+ITD   + +VL DR+ GG+S++DG +E+M+HRR+L DDGRGV E L E      N  G  VRG + + ++   A A   R    QEV +P ++LA              T+ + +  D  LP +V L+TL       VLLRL H +  GED+  +  A V L
Sbjct:  726 GKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLME------NGSGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGLRRD--LPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTL 937          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MA2B1_CAVPO (Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36
Identity = 93/221 (42.08%), Postives = 125/221 (56.56%), Query Frame = 2
Query:   17 GKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQL-GAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDY--SLPLNVALITLQELDDGSVLLRLAHLYEEGEDAEYSTLAKVEL 670
            GKE+ISR    + T  VF+TDSNGR+ L+R RDYR  W L   EPVAGNYYP+N  I+ITD K + +VL DR+ GG+S+ DG +E+M+HRR+L DDGRGVGEAL E         G  VRG + L ++    A A  R    +E+ +P L+    +      + H        S     LP +V L+TL      ++LLRL H +  GED+  +    V L
Sbjct:  720 GKEIISRFDTPLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQLTVLTDRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQEP------GSGGWVRGRHLLLLDTAREAAAEHRLLAEKELLAPQLVLAPGQGPSYHHDHHEAVPRKQFSGLRRQLPPSVRLLTLARWGPDTLLLRLEHQFALGEDSSRNLSLPVTL 934          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MA2B1_BOVIN (Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.207e-36
Identity = 91/220 (41.36%), Postives = 132/220 (60.00%), Query Frame = 2
Query:   17 GKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQL-GAGARWRRTTGQEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLQELDDGSVLLRLAHLYEEGEDAEYSTLAKVEL 670
            GKEVISR    + T  +FYTDSNGR+ L+R R+YR  W L   EPVAGNYYP+N  I+ITD   + +VL DR+ GG+S++DG +E+M+HRR+L DD RGVGE L++         GL VRG + + +++   A AR R     EV +P ++LA          ++  T+ + +  +  LP +V L+TL      ++LLRL H +  GED+  +  + V L
Sbjct:  715 GKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNK------EGSGLWVRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGGGARYRLEKAPRTQFSGLRRE--LPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTL 926          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MA2B1_MACFA (Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.330e-36
Identity = 94/220 (42.73%), Postives = 127/220 (57.73%), Query Frame = 2
Query:   17 GKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTG-QEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLQELDDGSVLLRLAHLYEEGEDAEYSTLAKVEL 670
            GKEVISR    + T+  FYTDSNGR+ L+R RDYR  W L   EPVAGNYYP+N  I+ITD K + +VL DR+ GG+S++DG +E+M+HRR+L DD RGV E L E      N  G  VRG + + ++   A A   R    QEV +P ++LA              T+ + +  +  LP +V L+TL       +LLRL H +  GED+  +  A V L
Sbjct:  727 GKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGKMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDERGVSEPLME------NGSGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGLRRE--LPPSVHLLTLASWGPEMLLLRLEHQFAVGEDSGRNLSAPVTL 938          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MA2B1_FELCA (Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.048e-35
Identity = 89/214 (41.59%), Postives = 123/214 (57.48%), Query Frame = 2
Query:   17 GKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQ-EVYSPLLLAFTQEKLETWTESHLTKSTAMESDYS-----LPLNVALITLQELDDGSVLLRLAHLYEEGEDA 640
            GKE+ISR    + T+ +FYTDSNGR+ L+R RDYR  W L   E VAGNYYP+N  I+I D   + +VL DR+ GG+S++DG +E+M+HRR+L DDGRGVGEAL E         G  VRG + + ++++   A   R   + EV +P      Q  L     +      A    +S     LP +V L+TL   D  ++LLRL H +  GED+
Sbjct:  724 GKEIISRFDTVLETKGLFYTDSNGREILERRRDYRPTWKLNQTETVAGNYYPVNSRIYIRDGNMQLTVLTDRSQGGSSLRDGSMELMVHRRLLKDDGRGVGEALLEDGL------GRWVRGRHLVLLDKVRTAATGHRLQAEKEVLTP------QVVLAPGGGAPYHLKVAPRKQFSGLRRELPPSVHLLTLARWDQKTLLLRLEHQFAVGEDS 925          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MA2B1_MOUSE (Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.298e-34
Identity = 90/220 (40.91%), Postives = 129/220 (58.64%), Query Frame = 2
Query:   17 GKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLG-AGARWRRTTGQEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLQELDDGSVLLRLAHLYEEGEDAEYSTLAKVEL 670
            GKEVISR    M T+  F+TDSNGR+ LKR  DYR  W+L   EPVAGNYYP+N  I+ITD + + +VL DR+ GG+S++DG +E+M+HRR+L DD RGV E L E+        G  VRG + + ++ +  A AR R    QEV +P ++L+           +  T+ + +  +  LP  V L+TL       +LLRL H +   ED++ +  + V L
Sbjct:  727 GKEVISRFDTPMKTKGQFFTDSNGREILKRRDDYRPTWTLNQTEPVAGNYYPVNTRIYITDGQMQLTVLTDRSQGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLET------DTGDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAPQVVLSLGGSSPYHSRATPKTQFSGLRQE--LPPQVHLLTLARWGPKMLLLRLEHQFALKEDSDRNLSSPVTL 938          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MANA_DICDI (Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.542e-30
Identity = 75/218 (34.40%), Postives = 129/218 (59.17%), Query Frame = 2
Query:   14 VGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITD--KKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWR-RTTGQEVYSPLLLAF--TQEKLETWTESHLTKSTAMESDYSLPLNVALITLQELD--DGSVLLRLAHLYE-EGEDAE 643
            +GKE++SR T  +VT++ +Y+DS G +  KR+ +YR  W+L V +P +GNY P+N   +I D  +  +F+++ DR+ G AS++DGQ+++M+HRR L DDGRGVG+ ++ES  +    +         L  + + + A+   R     +  PLL  F  TQ+    W   +    + + S   LP  + + TLQ LD  D ++LLR+ ++Y+ +G+D++
Sbjct:  721 IGKEIVSRYTTTLVTDQTWYSDSQGMEMQKRITNYRPSWNLTVVQPTSGNYVPVNAIAYIQDPNQSLQFTIVTDRSRGCASLRDGQLDMMMHRRTLKDDGRGVGQPMNESTQIVTTSK---------LIFHDISSYAQSHYRPAALSLSHPLLPMFTTTQQSSNDWNSQYQGVYSPLTSASPLPNGLKIQTLQWLDNQDNTILLRIENIYQIDGQDSQ 929          
BLAST of CX290072 vs. ExPASy Swiss-Prot
Match: MAN2_DROME (Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 2
Query:   23 EVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEAL 328
            E++ R+  ++ +  +FYTD NG  F+KR R  +         P+  NYYP+  G+FI D  +  ++L  +  GG+S+  G++EIM  RR+ +DD RG+G+ +
Sbjct:  852 EIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKL--------PLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGV 945          
The following BLAST results are available for this feature:
BLAST of CX290072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MA2B1_HUMAN6.461e-3743.64Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN... [more]
MA2B1_CAVPO1.439e-3642.08Lysosomal alpha-mannosidase OS=Cavia porcellus GN=... [more]
MA2B1_BOVIN3.207e-3641.36Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B... [more]
MA2B1_MACFA9.330e-3642.73Lysosomal alpha-mannosidase OS=Macaca fascicularis... [more]
MA2B1_FELCA6.048e-3541.59Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2... [more]
MA2B1_MOUSE2.298e-3440.91Lysosomal alpha-mannosidase OS=Mus musculus GN=Man... [more]
MANA_DICDI1.542e-3034.40Lysosomal alpha-mannosidase OS=Dictyostelium disco... [more]
MAN2_DROME4.982e-1335.29Alpha-mannosidase 2 OS=Drosophila melanogaster GN=... [more]
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Properties
Property NameValue
Genbank descriptionC02020B11SK IF1 Citrus clementina cDNA clone C02020B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290072 ID=CX290072; Name=CX290072; organism=Citrus clementina; type=EST; length=680bp
ACAGAAGATAGTGGTTGGGAAAGAGGTAATATCACGGATGACAGCCAACA
TGGTCACAGAAAAGGTCTTTTATACTGATTCGAACGGAAGGGACTTCCTA
AAGCGGGTCCGAGACTACAGAGCTGACTGGTCCCTCCAAGTTAATGAACC
AGTAGCAGGGAACTACTATCCACTTAATCTTGGAATTTTCATTACGGATA
AGAAATCTGAATTCTCAGTCTTAGTTGATCGTGCTACTGGAGGAGCCAGC
ATTAAAGATGGACAAGTAGAGATAATGCTTCATAGGCGTATGCTTGCTGA
TGATGGCAGGGGAGTTGGAGAAGCCCTTGATGAAAGTGTTTGTGTTCGAG
ATAATTGTGAAGGACTAACGGTTAGAGGAAATTATTATTTGAGCGTCAAT
CAACTAGGGGCTGGAGCACGCTGGCGGCGAACAACTGGCCAAGAAGTTTA
TTCACCACTTCTCTTGGCTTTCACACAAGAGAAGTTAGAGACTTGGACAG
AATCTCATCTGACAAAATCAACTGCCATGGAATCAGACTACAGCCTGCCT
CTCAATGTTGCTTTAATTACTCTTCAGGAGTTGGATGATGGAAGTGTTCT
TCTGCGACTGGCACATCTATACGAGGAGGGTGAAGATGCCGAGTACTCAA
CTCTAGCCAAAGTCGAACTGAAGAAAATGT
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